Gene Sala_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1922 
Symbol 
ID4082779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2026032 
End bp2027099 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content68% 
IMG OID638010299 
Producthypothetical protein 
Protein accessionYP_616967 
Protein GI103487406 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03019] FemAB-related protein, PEP-CTERM system-associated 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.26263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGCGC TCGCCGACCC GGCGATGAAG GCGTTCGCTG GCACACCGCT GTCCGACGCG 
GCCGAATGGG ACGCCTATGT CGCGGCCCAT CCGCAGGCGA CACCGTTCCA CAGCCGAGCG
TGGTGTGAGG CGATCACCAG GGCGACCGGG CATCGATGCC ATCTGGTGAC CGCGCGCGAT
GCGCGCGGCG GCCTGACCGG GCTGCTGCCG CTGCACCACA TCCGCTCGCC ACTGTTCGGG
CAGGCGCTCG TCGGTAGCGG CTTTGCCGTC GGCGGCGGCA TCTTGGCCGA CGATCGCGCC
GTGGCCGCGA CGCTGGCAAG CGGCGCGGCG GAGATGGCGC GGGCACTCGG CGTGCCGTCG
GTCGAACTAC GCGGCGGCCC GCTGCCCGAA GGCGAGGGCT GGATGCGCGA CGAGGGCGTC
TATGCGGGCT TTGCGCGCGA CCTCGCCGGT GATGACGACG CCGAACTGCT CGCCATCCCG
CGCAAGCAGC GCGCCGAGGT GCGCAAGGCG CGGGCGAGCG CGCTGACCGT TACCATCGGG
CGTGACGATG CTGAACGGGA CGATCATTAT CGCGTTTACG CCACCAGCGT CCGCAATCTT
GGCACGCCCG TTTTTCCCAA GAGCCTGTTC GATGCGGTGC TCGACGCCTT TGGCGAGGGT
GCCGACATAT TGACCGTGCG CGACGGCGGA CGGCCGATAG CCAGTGTGCT CAGTCTTTAT
TGGCGCGGCG TGGTGATGCC CTATTGGGGC GGTGGGCTCG CCGACGCGCG GCGCCTCCGT
GCCAATGAGT TGATGTATTT CGCTTTGATG AGTCACGCTC GGGCGAGGCA GTGCATCGCT
TTCGATTTCG GGCGGTCGAA GGTCGGCACC GGTCCCTGTT ACTACAAGAA GAATTGGGGT
TTCGAGCCGC AGCCGCTCGC CTATGCGCGC TGGCTCGCGC CGGGGCGGCG CGCGCGCGAT
ACCAATCCGA ACAGCGCGAA ATACCGGATG CAGGTCGATC TGTGGAAGCG GCTGCCGCTG
TGGGCGGCGA ACCGCATCGG CCCGCTGATC GCGCGCGGAT TGGGGTGA
 
Protein sequence
MNALADPAMK AFAGTPLSDA AEWDAYVAAH PQATPFHSRA WCEAITRATG HRCHLVTARD 
ARGGLTGLLP LHHIRSPLFG QALVGSGFAV GGGILADDRA VAATLASGAA EMARALGVPS
VELRGGPLPE GEGWMRDEGV YAGFARDLAG DDDAELLAIP RKQRAEVRKA RASALTVTIG
RDDAERDDHY RVYATSVRNL GTPVFPKSLF DAVLDAFGEG ADILTVRDGG RPIASVLSLY
WRGVVMPYWG GGLADARRLR ANELMYFALM SHARARQCIA FDFGRSKVGT GPCYYKKNWG
FEPQPLAYAR WLAPGRRARD TNPNSAKYRM QVDLWKRLPL WAANRIGPLI ARGLG