| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1920 |
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| Symbol | |
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| ID | 4082777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2023217 |
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| End bp | 2024695 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638010297 |
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| Product | ABC transporter related |
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| Protein accession | YP_616965 |
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| Protein GI | 103487404 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02602] eight transmembrane protein EpsH (proposed exosortase)
[TIGR02914] EpsI family protein
[TIGR03109] exosortase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCT GGCAGCGCCA TCTGGTCACG CTGGCCTTGC TGGCGGCGGT GATCCTCGCG
CTCTTCTGGC GCGACGCCGC CGACATGGCG GGCATCTGGT GGAACAGTTC GACCTTTACC
CATTGCCTGC TGATGGTGCC GCTGATCGGC TGGCTGGTCG CGCAGCGGAT CGACCTGTTG
CGCCCGCTGG CGCCGACCTT CTGGTGGCCC GCGTTGCTGT GGATGACGGG GGCGGGGTGC
GTCTGGCTCG TCGGCGAGGC GGCGGGGGTG GCGTTGTTCC GCCAGCTCGG CCTCGTGCTG
ATGCTCCAGG GCGCGGTGGG CGTCGCGCTC GGCGAAAAGC TGGTGCGCGG GCTGCTCTTC
CCGCTCGCCT ATGCGCTGCT GCTCGTTCCC TTCGGCGAGG AGCTGGTGCC GCTGCTCCAG
ACCTTTACCG CACATATCAG CGTCGCGCTG CTCCACCTGT CGGGCTTCGC TGCCGAGATG
CAGGGCGTGT TCATCACCAC GCGCGCGGGT TTTTTCGAGG TGGCCGAGGA ATGTTCGGGA
GTCAATTTCC TGATCGCGAT GCTCGCCTAT GCCGCGTTCG CGGCGCATCT TTGCTTCAAG
AGCTGGACGC GGCGGATCGT CTTTGTCGTC GCCGCGCTCG CGACGACGAT CCTGGCCAAT
GCGCTGCGCG CCTATGGGAC GATGCTCGCG GCCGAGGTCT GGGGGATCGA GGCGGCGGGC
GGGATCGACC ATATTGTCTA TGGCTGGATC TTCTTCGGCC TCGTCATCCT GATCGTGATG
CTGGCGGCGC GGCGCTGGTT CGACCGGCCC GCGAACGACG CCGCCGTGGA TGTGCGTGGG
CTGGAGGGGC CGATCCGTTT TGCGGGGCCG GGCCGCGCGG TGCTGCCCGC CGCCTTGCTC
TTGCCGCTGC TGTTCGCCGC ATGGGGTCTG CTCGTCGCCG GGCGCAGCGC GCCGTTGCCG
CCCACCATGG CGGTCGAGGC GCCGCCGGGC TGGCGCGAAG CGCGTGTCGG CGGCATCCCC
TGGACGCCGC GCTTCGACGG CGCCGACCAG CGGCTTTTGC GGCACTTTGC GAACGCGAAG
GGGCAGGTCG TGACCGTCGC GATCGGCGGT TATGAGCGCC AGGCCGAGGG GCGCGAGGTC
GTCGCCTTCG GGCAGGGCGC GGTCGATCCC GACAGCCGAT GGGCGTGGAG CGCGGCGCTG
CCCGCCGTCG ATGGGGGCAA GACCGAACGC CTGCTGCACC CCGGCCCGGT GCTGCGCGAC
GCCGCGACCT GGTATGTCGT CGGCGGCGAC GTGACGGGCA GCGCGCGTTC GGCCAAGCTG
GCGGGGCTGA AAGCGCGCCT TGCCGGCGGC GACCCGCGCG CGCTGACGCT GATCGTGTCG
AGCGAGACGG CGCAGGGCGG GCGCGATGCG ATCAGGGATT TCGTTTCCGC GTCGGGCGGA
GCCAGGGCGA TGGCTGACCG CGCGCTCAAA AGCCGCTAG
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| Protein sequence | MTRWQRHLVT LALLAAVILA LFWRDAADMA GIWWNSSTFT HCLLMVPLIG WLVAQRIDLL
RPLAPTFWWP ALLWMTGAGC VWLVGEAAGV ALFRQLGLVL MLQGAVGVAL GEKLVRGLLF
PLAYALLLVP FGEELVPLLQ TFTAHISVAL LHLSGFAAEM QGVFITTRAG FFEVAEECSG
VNFLIAMLAY AAFAAHLCFK SWTRRIVFVV AALATTILAN ALRAYGTMLA AEVWGIEAAG
GIDHIVYGWI FFGLVILIVM LAARRWFDRP ANDAAVDVRG LEGPIRFAGP GRAVLPAALL
LPLLFAAWGL LVAGRSAPLP PTMAVEAPPG WREARVGGIP WTPRFDGADQ RLLRHFANAK
GQVVTVAIGG YERQAEGREV VAFGQGAVDP DSRWAWSAAL PAVDGGKTER LLHPGPVLRD
AATWYVVGGD VTGSARSAKL AGLKARLAGG DPRALTLIVS SETAQGGRDA IRDFVSASGG
ARAMADRALK SR
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