| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1917 |
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| Symbol | |
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| ID | 4082774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2018874 |
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| End bp | 2019749 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010294 |
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| Product | transcription factor jumonji, JmjC |
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| Protein accession | YP_616962 |
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| Protein GI | 103487401 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.208156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGC ATCAGACGAT CAACCGCCCC GTCTTTCCGG CTGAAACGCT GGCAAGCATG
GCCACGCTTT ATCCGGCGCA GGCGGGGCTG CTCCACCACA ACCTGCCCGA CCATCCCCTG
CTGTCGATCG AGGCGCTGGC GCGGCTTGGC GAGACGCTGT CCGCGAGCGC GGTCGAATAT
AACCCCGGCA ATCTGCCCGT CGGCATCCGG CCCGAGGATG TCCCCTCGAA CGGGCTGTCG
ATTGGCGAGA CGATCCGCAC GATCGACACC AACGGCAGTT GGGCGGTGCT CAAGAATATC
GAGACGATGC CCGACTATCG CGCGCTCTTG ATGGACCTGC TCGGCGAGCT GGAATCGGTG
GTGGTGCCGC GCACCGGGGC GATGCTGACG CCGCAGGGCT TTATCTTCAT CTCGTCGCCG
GGGTCGATCA CGCCGTTCCA CTTCGACCCC GAACATAATA TCCTGCTCCA GCTGCGCGGC
ACGAAGGTGA TGAATGTCTG GCCCGCGGGC GACGAACGCT TTGCGCGCCG CATCGAACAT
GAACGCTATC ACACCGGCGG GCATCGCAAC CTGCCGTGGG ACGAGGCGTT TCGCGGCGGC
GAGCAGCAGG TGCCGCTTGG CCCCGGCGAT GCCGTGCTGA TGCCCGTGAT GGCGCCGCAT
TTCGTCGTCA ATGGCGATGC ACCGTCGATT TCGCTGTCGA TCACCTGGCG CAGCGAATGG
AGCTATCGCG AGGCCGAGGC GCATGCCGCC AACGCCGCGT TGCGCCGCAT GGGGCTGGAC
CCCGCCATGC CACCGCGCTG GCCGCGCCAT GCGCGGGCAA AGAGCCTGGG CTGGCGCATC
GCCCGCAAGC TGCGGCTGGT CGGTGAGCGA CTGTGA
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| Protein sequence | MTVHQTINRP VFPAETLASM ATLYPAQAGL LHHNLPDHPL LSIEALARLG ETLSASAVEY
NPGNLPVGIR PEDVPSNGLS IGETIRTIDT NGSWAVLKNI ETMPDYRALL MDLLGELESV
VVPRTGAMLT PQGFIFISSP GSITPFHFDP EHNILLQLRG TKVMNVWPAG DERFARRIEH
ERYHTGGHRN LPWDEAFRGG EQQVPLGPGD AVLMPVMAPH FVVNGDAPSI SLSITWRSEW
SYREAEAHAA NAALRRMGLD PAMPPRWPRH ARAKSLGWRI ARKLRLVGER L
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