Gene Sala_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1916 
SymbolinfA 
ID4082773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2018583 
End bp2018801 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content58% 
IMG OID638010293 
Producttranslation initiation factor IF-1 
Protein accessionYP_616961 
Protein GI103487400 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.124446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAG AAGAACTTCT GGAAATGCGC GGCCAGGTGG TCGAACTGCT GCCCAACGCG 
ATGTTTCGCG TCAAACTGGA AAACGACCAC GAGATTCTGG GCCACACCGC GGGCAAGATG
CGCAAGAACC GCATCCGCGT GCTCGTCGGC GACGAAGTGC TCGTCGAACT CACGCCCTAT
GACCTGACCA AGGGTCGGAT CACCTATCGC TTCAAGTGA
 
Protein sequence
MAKEELLEMR GQVVELLPNA MFRVKLENDH EILGHTAGKM RKNRIRVLVG DEVLVELTPY 
DLTKGRITYR FK