| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1913 |
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| Symbol | |
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| ID | 4082769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2013866 |
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| End bp | 2016454 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638010289 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_616958 |
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| Protein GI | 103487397 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTGC GCAACATCCT GTTGGGCGCC ACCATGCTGT GCGCCGCGAC CACTCCCGCC
CTCGCCTTTG CCCAGGACAC GGCCCCCGCG ACGCCAGCCG CCACCGACGA CGGCACGGAA
ACGTTTGACG ACGCCGATTA TGGCAATGAC ATCATCGTCA CCGCCACCGG TCGCGCGCAA
CGGTCGCAGG ATATTCCGAT CGCGGTCAAT GTGGTCGGCG GCGAGCAGCT GGAAAACTCC
GGCATCAGCG ACATTCGCGG GCTTCGCCAG ATCGCGCCCA GCTTTCAGGC GACGACCGGC
CAGTCCACGG CCACCGGCGT CGTGCTGCGC ATTCGCGGTA TCGGCACCGC GGGCGACAAC
CCCGGCTTCG AACCCTCGGT CGGCGTTTTT GTCGATGGCG TTTTTCGCGC GCGGGCAGGC
CTTGCGCTGG CCGACCTGCC GCCGATCGAC CGCGTCGAGG TGCTGCGCGG GCCGCAGGGC
ACGCTGTTCG GTCGCAACAC CTCGGCCGGC GCGCTCAACA TCATCACGCA AAAACCGAGC
TTCAACCTCG GTGGTTATGC CGAGGCGAGC TATGGCAATC TGGACGAGAT CGAGCTGAAG
GCCGGCGTCA CGGGGCCGGT ATCCGAAACG CTCGCAGTGC GGCTCGACGG CGGTTATCAC
AAGCGCGACG GCTATATCAA AGACGTCAAC AGCGACCGCC GTTTCAACGA TCTCGACCGC
TGGTCGGTGC GCGGACAGGC CTTGTTCGAA AAGGACGATG TCTCGTTCCG CCTGATCGCC
GACTATGCCC GGACCGACGA ACAATGCTGC GGCGCGCTCA ACACCAATTC GGGCTTTGCG
CAGCCGGGCA CGCCGGCCTT TGCCGCGAGC GCGGTCATCC AGGGGCTCGC CGCCGCGAAC
GGCCTGACGG GCATCGTGAC GCCCTTCAAT CCGAAGGATC GCGAAGTCGC CTATTCGCCC
GCGCGCGACC TCACCGAAAA AATGCGCGAA TGGGGCGTGT CGGGCCAGCT TGACTGGGAT
CTGGGCGGCG TCGAGCTGAC GTCGATCACC GCGTGGCGCG ACTGGAAGGC GACGCGCGGC
ATGGATGTCG ACTTCTCCGG CATCGACCGC GCCTATCGCG AGAATATGCC GATCGGGATG
CGCGACTTCA CGCAGGAAAT CCGCCTGAAG GGCACGGCGT TCGACGATCA TGTCGACTGG
CTGATCGGCG GCTTCTATCT CAACGAAAAG CTCAACTACA CCGAACGCAC CCGCTTTGGC
ACGCAGGGCG CGCAATATGT CGATGCCTTC ATCAACGCGC TGACCGATGC GTCGGTGCCC
GGTCCGACGG GCTTCCAGAT TTTCCAGTCG ATCCCCAATG CGCCGCTGGT GGGCCAGGTG
CTGCTGGCGT CGAACCCGCA GCTCGCGGCC GCCGCGGCGC AGGCGGGCGT GCTCGACACC
TTCCTGACGC CGCTTCCGGG GCCGCAGGCG GGGCAGGGTC AGGTCGGCGA CCGTTACCGC
GTCGATACCC AAGCCTTTGC GCTGTTCACG CACAATATCA TCGACTTCAA CGACAATGTC
TCGCTGACCC TTGGCCTGCG CTACAATCAT GAATCGAAGA AGCTGGACGC CGACCTGCAG
TCGAACCTGC CGGGCTGCGC GACCTTGCAG AGCACACGCT ACGGCCTCTA TCGTCAGGCG
CTCCAGGGTC TGCCGTCGGG GCTTGGCAAT GCGATCTTCA ACCTCGTCTG CAATCCCGTC
GTCAATCCCG AGTTCAACGG CATCTATCGC GACAAGCGCA GCGAGAGCAA GCTGACCGGA
ACCGCCAAGC TGTCGGTCAA GCTCGACGAG CGCGTCATGG TCTATGGCGG TTATGACCGC
GGCTATAAAT CGGGCGGCTA CAACCTCGAC CGCGGTTCGT TCGACACCGC GTTCCTCGGT
GGCAACGGCG CGCAGGCGTC GGACCTCGAG TTCGGGAATG AAGATGTCGA TTCGTTCGAG
TTCGGTGTGA AGACCGACCT GAGCACGGCG TTCCAGTTCA ACGCCAACGC CTTCTACACC
GAGCTCAAGG GCTATCAGAA TCTGGCGTTC GAGGGGAACA ACTTCGTCGT CCAGAACTTC
GACAAGGTGG TGGCGCAGGG CGTCGAGCTG GAATCGATTA TCCGTCCCGC GCCGAACCTC
AACATCATGC TCGGCTATTC CTATATCGAT ACCGAGGTGA AGGATCCGGT CGCCGGGCCG
GACAATGGCC TGCCGCTCAC CAATTCGCCC AAGCATGTCG TCACCGGCGC GGTCACCTGG
ACCCCGCAGC TCAGCAGCAA TGTCGGCGGC CTGCTGCATG TCGACTGGCG CATGAACAGC
GACGCAAACA CGATCAACGA TCCGGTCGCG GTGCCGTTCA CGACCAACGA CGGCTATACG
ATCGTCAATG CGCGGGCGGG GCTGAACTTC GGACCCGACC AGAATTATGC GGTCGAGTTC
TACGTCGAGA ATCTGTTCAA CAAATATTAC AACATCACGG CGTTCCCGAT CCCCGAACAA
AGCGCGAGCT TCGCCGTCTA TCCGGCGCCG CCGCGCCTCT ATGGGGTGAA GCTGCGCGCC
AAGTTCTGA
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| Protein sequence | MTLRNILLGA TMLCAATTPA LAFAQDTAPA TPAATDDGTE TFDDADYGND IIVTATGRAQ
RSQDIPIAVN VVGGEQLENS GISDIRGLRQ IAPSFQATTG QSTATGVVLR IRGIGTAGDN
PGFEPSVGVF VDGVFRARAG LALADLPPID RVEVLRGPQG TLFGRNTSAG ALNIITQKPS
FNLGGYAEAS YGNLDEIELK AGVTGPVSET LAVRLDGGYH KRDGYIKDVN SDRRFNDLDR
WSVRGQALFE KDDVSFRLIA DYARTDEQCC GALNTNSGFA QPGTPAFAAS AVIQGLAAAN
GLTGIVTPFN PKDREVAYSP ARDLTEKMRE WGVSGQLDWD LGGVELTSIT AWRDWKATRG
MDVDFSGIDR AYRENMPIGM RDFTQEIRLK GTAFDDHVDW LIGGFYLNEK LNYTERTRFG
TQGAQYVDAF INALTDASVP GPTGFQIFQS IPNAPLVGQV LLASNPQLAA AAAQAGVLDT
FLTPLPGPQA GQGQVGDRYR VDTQAFALFT HNIIDFNDNV SLTLGLRYNH ESKKLDADLQ
SNLPGCATLQ STRYGLYRQA LQGLPSGLGN AIFNLVCNPV VNPEFNGIYR DKRSESKLTG
TAKLSVKLDE RVMVYGGYDR GYKSGGYNLD RGSFDTAFLG GNGAQASDLE FGNEDVDSFE
FGVKTDLSTA FQFNANAFYT ELKGYQNLAF EGNNFVVQNF DKVVAQGVEL ESIIRPAPNL
NIMLGYSYID TEVKDPVAGP DNGLPLTNSP KHVVTGAVTW TPQLSSNVGG LLHVDWRMNS
DANTINDPVA VPFTTNDGYT IVNARAGLNF GPDQNYAVEF YVENLFNKYY NITAFPIPEQ
SASFAVYPAP PRLYGVKLRA KF
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