| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1904 |
|---|
| Symbol | |
|---|
| ID | 4082610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2002725 |
|---|
| End bp | 2003594 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638010280 |
|---|
| Product | beta-lactamase-like protein |
|---|
| Protein accession | YP_616949 |
|---|
| Protein GI | 103487388 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.177058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAG TAATGAGCCT GTTTCTGTGG CTTGCGGGTG CGGGCGGGAC GCCCGTTCCG
GCGATCGATC CGCTGACGCA GCCGATCGAG ACGTCACGAT CGGCGGAATG GCTGGCGCCT
GCGGAACCCG AAAAAATCTT TGGCAACACC TATCTTGTCG GCTTCGCGGG GCTGAGCGTC
GCACTGATCG ACACGGGCGA CGGGCTGGTG CTCGTCGACG GCGCGCTGCC GCAGGCGGCG
CCCGCAATCC TCGCCAATGT GCGCAAGCTC GGCTTCGACC CGCAAGACAT CAAATATATT
CTGAGCACCG AACCCCATTT CGACCATGCC GGCGGCCTCG CCGCGCTCGC GCGCGACACC
GGCGCGGCGG TGGTCGCAAG CGTGCGCGGC GCCGAGGGGC TGCGCAGCGG CCGCCACGCG
GCCGACGACC CGCAGCTCGG CTATGGCGGC AGTTGGCCCG CGGTCGCGAA CGTCCGCACG
ATGAAGGATG GCGAAGTGCT GCGGCTTGGC ACGACGGCGA TCACCGCCAT CGCAACGCCG
GGGCACACGA TGGGCAGCAT GAGCTGGACG TGGCAGGCAT GCGAGGGCCG CGTTTGCAAG
GCGGTGGTGT TTGCATCGAG CCTCAATCCC GTCTCGGCCG ATGGCTATCG CTTCACCTCC
CGCGCGGGCA AACCCTTCAT CAAAGGCTTT GAGGCAAGTT ATCGCAAGAT GGATGCGGTG
CCGTGCGACA TATTGATCTC AGCGCACCCC GACAATGCGG GCAACGGGCG CTACAGCGAA
AAAGCCGGCG CCTGCCGCGC CTATGCCGAC CGCTCGCGCC GCGCGCTCGC CAGGCGGCTG
GCCAGCGAGC GCGTCGAAAC ACCGAAGTAG
|
|---|
| Protein sequence | MIEVMSLFLW LAGAGGTPVP AIDPLTQPIE TSRSAEWLAP AEPEKIFGNT YLVGFAGLSV
ALIDTGDGLV LVDGALPQAA PAILANVRKL GFDPQDIKYI LSTEPHFDHA GGLAALARDT
GAAVVASVRG AEGLRSGRHA ADDPQLGYGG SWPAVANVRT MKDGEVLRLG TTAITAIATP
GHTMGSMSWT WQACEGRVCK AVVFASSLNP VSADGYRFTS RAGKPFIKGF EASYRKMDAV
PCDILISAHP DNAGNGRYSE KAGACRAYAD RSRRALARRL ASERVETPK
|
|---|
| |