| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1894 |
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| Symbol | |
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| ID | 4082600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1993256 |
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| End bp | 1995385 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010270 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_616939 |
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| Protein GI | 103487378 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.123894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTGC TCTCTTCCGC CGGATTCACT CTCGCGCTTG TTCTTTCAGC CCCCGCCATC
GCGCAGGGTC GCACCGCGGG CAGCGACGAC GATGTGCATA CCGGCGGGCC GATCATCGTC
ACCGCCCCCT ATGTCCGCAG CCTCGACATT CTGGGCAATG TGTCGGTGCT CGAGGGCGAC
GAGCTGGCGC GCGACATCCG CGGCCAGATC GGCGACAGCC TGACGCGACA GGCGGGCGTG
TCGGCGACCA GCTTCGCCCC CGGCGCCTCG CGCCCCGTGC TGCGCGGCTT TTCGGGCGAG
CGCGTGCGCG TGCTGACCGA CGGGATCGGC TCGATCGACG TGTCGAACAC CTCGGCCGAC
CACGCCGTCA CCATCGACCC GTTGACCGTC GAGCGCATCG AGATATTGCG CGGTCCCGCG
GTGCTGCTGT TCGGCAGCCA GGCGATCGGC GGCGCGGTCA ACCTGTTCGA CCGCCGCATC
CCCCGCAAGG TGCCCGAGGA CCATGTCCAT ATCGACGCGA TCGGCGGCTA TGCGACCGCG
GCCGACGACC GCAACGCCGG TGGTTCGATT GACATCGCCC TGTCGCCGCA GGTCGTCGCG
CATTTCGACG GCAGCTGGCG CAAGACCGGC GACATGCGCA GCGGCGGCTT CGTCTATGCC
CCCGGACTGC GCGCCGAACT GCTCGACCTG GCCGCCGAAG AGGCCGAAGA AGGCCATGCC
GACGAAGCGG CCGAACTCAC CGAACAAGCC GGCTCGCGCG GCAAGGTCGC CAACACCGCG
AGCGAGACCT GGACGGCGGC GGGCGGTCTG TCGCTCATCA ACGACGGCGG CCAGCTCGGC
GTTTCGGTGA GCTATTATGA CAGCAATTAC GGCGTCCCGT CGCGCCCCGG CACCGAGCAC
CACCACGAAG AGGGTGAAGA GGGCGAGGAA GAGGAAGGCC ACGAGCCTGG CGAAGGCGCG
GTGACCATCG GCCTCAAGCA ATGGCGCGCC GACCTGCGCG GCGAGGTCGA GATGGGCGAC
GGCTTTTTCG ACAAGCTGCG CATCCGCGCG GGCTTCGCCG ATTATGAACA TACCGAGTTC
GAGGGCGACG AGGTCGGCAC GATATTCACC AACCAGGGCG TCGAGGGCCG GATCGAGCTG
GCCCAGAACG ACCGCGGCGG CTGGCGTGGC GCGAGCGGTG TGCAATATAG CCACCGCGAC
TTCAACGCGA TCGGCGCCGA AGCCTTCGTC CCGCGCAATC TCACGGACCA GTTCGCGCTG
TTCACCTTGC AGGAATGGCA AACGGGTCCG CTGGGCGTCG AAGCCGCGGC GCGCTTTGAA
AGCACCAGCG TCCGCGCGCC GACACTTGGC ATCGAACGCG ATTTTGATAC ATTTTCAGGC
GCACTCGGCG CCAATTACGA GCTTGCCGAG GGTGTGAAGG TCGGCGTCTC GGTCGCGCGC
GCGGTGCGCG CGCCGTCGGC CGAGGAACTT TTCTCGAACG GCCCGCATAT CGCGACGCAG
GCGTTCGAAG TCGGCGATCC GAACCTCAGG CGCGAGGCAA GCTGGGGGGC GGAGGCTTCG
TTCAAGCTGA AAACCGATCG TTTCAACCTC AGCCTGGCGG CCTATTCGAA CTGGTTCGAC
GACTTCATCT ATGCGGATGC CACCGGCGAG GAAGAGGATG AGCTTCCCGT TTTCCAGTAT
TTCCAGCGCG ATGCGCGTGT CTGGGGTTTC GAGGCCGAGG CGAGCGCGCG GCTCGCACAG
ATCGGCGGCT TCAACATCGT CGCCGATGCG ACCGCTGATA TGACGCGCGC GAAGATCAGG
GGCGGGCTCG ACCAGCACGC CCCGCGCATC CCGCCGCTGC GCGTGCTCGG CGGGCTGGAA
GCGCAAGGCG AGCGGATCGA CGCGCGCGCC GAAGTCGAAT GGACCGACGA CCAGACGCGC
ATCGCGCCGT TCGAAACGCC GACCAGGGGC TTTACGCTGG TCAATGCGTC GATCAGCTGG
CGTCCGCTGC CCGACAGCCG CAACCTGACG CTCAGCCTCG CCGCGAACAA TATATTCGAC
GTCGAGGCGC GGCGCCACGC GAGCTTCACC AAGGATTATG TGCCGCTCGC GGGCCGCGAC
ATCCGTTTGA CGGCGCGCGC GAGCTTCTGA
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| Protein sequence | MRLLSSAGFT LALVLSAPAI AQGRTAGSDD DVHTGGPIIV TAPYVRSLDI LGNVSVLEGD
ELARDIRGQI GDSLTRQAGV SATSFAPGAS RPVLRGFSGE RVRVLTDGIG SIDVSNTSAD
HAVTIDPLTV ERIEILRGPA VLLFGSQAIG GAVNLFDRRI PRKVPEDHVH IDAIGGYATA
ADDRNAGGSI DIALSPQVVA HFDGSWRKTG DMRSGGFVYA PGLRAELLDL AAEEAEEGHA
DEAAELTEQA GSRGKVANTA SETWTAAGGL SLINDGGQLG VSVSYYDSNY GVPSRPGTEH
HHEEGEEGEE EEGHEPGEGA VTIGLKQWRA DLRGEVEMGD GFFDKLRIRA GFADYEHTEF
EGDEVGTIFT NQGVEGRIEL AQNDRGGWRG ASGVQYSHRD FNAIGAEAFV PRNLTDQFAL
FTLQEWQTGP LGVEAAARFE STSVRAPTLG IERDFDTFSG ALGANYELAE GVKVGVSVAR
AVRAPSAEEL FSNGPHIATQ AFEVGDPNLR REASWGAEAS FKLKTDRFNL SLAAYSNWFD
DFIYADATGE EEDELPVFQY FQRDARVWGF EAEASARLAQ IGGFNIVADA TADMTRAKIR
GGLDQHAPRI PPLRVLGGLE AQGERIDARA EVEWTDDQTR IAPFETPTRG FTLVNASISW
RPLPDSRNLT LSLAANNIFD VEARRHASFT KDYVPLAGRD IRLTARASF
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