Gene Sala_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1856 
Symbol 
ID4082034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1951124 
End bp1952023 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID638010231 
Producthypothetical protein 
Protein accessionYP_616901 
Protein GI103487340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.824433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCG ATTCGCCCTC GCCCGTCATC CCCTTCCTGA TCGCCTGCGC GGGGATCGCG 
ACCTTTTCGG CGATGGACGT GCTGATGAAG GGGCTGTCGA TTAACATCGG CGCCTATAAC
GCGGTCCTCT GGCGCACCGG CGCCGGGGCA TTGCTGAGCG GGCTTATCTA TTTCGCGAGC
CGCCCCAAAT GGCCCGGCCA GGCGACGATG CGGATCCACG CCTGGCGTTC GCTCTTCGTC
GCGGGCATGG CGCTCTGCTT CTTCTGGGCG CTCGCGCGGC TGCCGATCGC CGAAGCGATC
GCGATCGCCT TCGTCGCGCC GTTGATGGCG CTTTACATGG CTGCGATCTT CCTCGGTGAA
AAGATCGGCC CGCGCTCGAT CGCAGCCTCG CTGCTCGGGC TCATCGGGGT GATCGTGATC
GTCGCGGGCA AATTGGGCGG CGATTACAGC GACGAAGCGC TGCTCGCGGT GGGCGCGGTG
TTCCTTTCGG CGGTCTTCTA CGCCTATAAT CTCGTCCTCG CGCGGCGGCA GGCGAAGATG
GCCGAACCGC TGGAAATCGC CTTTTTCCAG AATGCGTTCG TGACCGCGAT CCTCGCGGTC
GGCGCGCCCT GGTTCCTCGC CGTCCCCGCC GCAAGCCATG CGCCGCACAT CGCCGGCGCC
GCGGCGCTCG CAACGGCATC GCTGCTGTTG CTGAGCTGGG CCTATGCCCG TGCCGAGACG
CAGATCCTCG CGACGACCGA ATATACCGGC TTCCTCTGGG CGATGCTCTT CGGCTGGATG
TTCTTCGACG AAGCGGTGAC CTGGCCGACA ATCGCCGGCG CCTTCCTCAT CGTCGCCGCC
TGCCTGATCG TCACGCGCAA GGCGCCCCAC GGCGATCCGA TTGAACCCGC CGCGGCGTGA
 
Protein sequence
MRPDSPSPVI PFLIACAGIA TFSAMDVLMK GLSINIGAYN AVLWRTGAGA LLSGLIYFAS 
RPKWPGQATM RIHAWRSLFV AGMALCFFWA LARLPIAEAI AIAFVAPLMA LYMAAIFLGE
KIGPRSIAAS LLGLIGVIVI VAGKLGGDYS DEALLAVGAV FLSAVFYAYN LVLARRQAKM
AEPLEIAFFQ NAFVTAILAV GAPWFLAVPA ASHAPHIAGA AALATASLLL LSWAYARAET
QILATTEYTG FLWAMLFGWM FFDEAVTWPT IAGAFLIVAA CLIVTRKAPH GDPIEPAAA