| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1853 |
|---|
| Symbol | |
|---|
| ID | 4082031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1947293 |
|---|
| End bp | 1948447 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638010228 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_616898 |
|---|
| Protein GI | 103487337 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.575321 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGG GAGGGGGCTG CATGACCACG CAACGCCACT ACGGCATGGA CTGGCTGCGC
ATCGGCGCCT TCGCGCTGCT GATCCTCTAT CATATCGGCA TGTATTTCGT GCCGTGGGAT
TGGCATGTGA AGATCGATCC GACGATCGAT TGGGTTGCGT TGCCGATGTA CGCGACGAAT
GGCTGGCGGC TTCCATTGCT GTTTCTGGTG TCGGGTTATG CGAATGCTGC GTTGCTGGTG
AAGCTGGACG GCGCCGGGGC GTTCGCGCGG TCGCGCAGCG CGCGGTTGCT GATCCCGCTG
GCGTTCGGGA TCATCGTGGT CATCCCGCCG CAACCATGGG TCGAGCTGGT CGGCCAGCAT
GGCTATCCGC ACGGCTTTCT GCGCTTCTGG ACGTCGGACT ATTTCCGCTT CGGCACGCTG
GGCGGGATCG TGCTGCCGAC CTGGCAGCAT CTGTGGTTCG TTGTCTATCT GTGGACCTAT
ACGATGCTCG CCGCGCTGCT GCTCGCGGCG GTGCCCGCGG CGATGCGGGG GTGGATCGCC
GATGGCGCGG CGCGGCTGCT GTCGGGCTGG CGGCTGCTGA TCGTGCCGAT GCTGTGGTGG
CTCGCGGTTT ACGGCGCCTT TCCTGAGCAT GACGAGACGC ATGCGCTGTT CGACGACGGG
CCGGCGCATC TCCGCTATCT TATGGCTTTC GGCGCGGGCT GGCTGCTGCG CGTGCGGCCC
GCCCTGTTCG CGGCCGTCGC CCGCTGCTGG AAGGTCGCCG CGCTGCTTGG CCTGCTGGCG
TTCCTGCCGA TCATGTGGGT CGAATCGACT TGGTCCGGCG ACATGCGCGC GCCCGACTGG
GCGATCGCGC TATTCCATGT CGCGCGGCGG GTGCAGGGCT GGGTAGCGAT CGTCGCGCTC
ATCGGCGTCG CCGACCGGTA CTGGAACCGC GACCATCCAA AACGCGCGAT GTTCGCCGAG
GCGGTCTTCC CCTTTTACAT CATTCACCAG ACGATCATCG TCGTCGCCGG ATGGTATCTG
CTGCGAGCGG GCGTGGCGGC GTTGCCATCC TTCCTGATCC TGCTCGCGGC GACGATGCTG
GGATGCTGGC TTTTCTATGC GATTGGGCGC AGCATCGGCT GGCTGCGGCC GCTGATCGGG
CTCCAACGGC GATAG
|
|---|
| Protein sequence | MMKGGGCMTT QRHYGMDWLR IGAFALLILY HIGMYFVPWD WHVKIDPTID WVALPMYATN
GWRLPLLFLV SGYANAALLV KLDGAGAFAR SRSARLLIPL AFGIIVVIPP QPWVELVGQH
GYPHGFLRFW TSDYFRFGTL GGIVLPTWQH LWFVVYLWTY TMLAALLLAA VPAAMRGWIA
DGAARLLSGW RLLIVPMLWW LAVYGAFPEH DETHALFDDG PAHLRYLMAF GAGWLLRVRP
ALFAAVARCW KVAALLGLLA FLPIMWVEST WSGDMRAPDW AIALFHVARR VQGWVAIVAL
IGVADRYWNR DHPKRAMFAE AVFPFYIIHQ TIIVVAGWYL LRAGVAALPS FLILLAATML
GCWLFYAIGR SIGWLRPLIG LQRR
|
|---|
| |