Gene Sala_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1835 
Symbol 
ID4082187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1930708 
End bp1931211 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content66% 
IMG OID638010210 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_616880 
Protein GI103487319 
COG category[S] Function unknown 
COG ID[COG3760] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0751413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.748451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGGCG AGGCGGGATT GCTGGCGGAC CTTGATGCGC TTGCCATCCC CTTCGCCGCG 
CATGAGCATG AGGCGGTGTT CACCGTCGCC GAGAGCGATG CGGTGAACGC CGCGATTCCC
GGTGCGCATA CGAAAAATCT GTTCCTGAAG GACAGTGGCG GCGCCTTCTG GCTCGTCACC
GTGCCGTCCG AAGCGCGCGT CGATTTGAAG GCGTTGCCCG CCGCGATCGG CAGCAAGCGG
GTGAGCTTCG GCAAAGCCGA CGCCATGGAG CAACTGCTCG GCATCGCGCC GGGATCAGTG
ACGCCGCTGG CGGCGATCAA TGCGGCGCCG GGCAGCATCA CAGTGGTGAT TGACGCGCGA
CTGGCGGCGG CGCCCATCGT CAACGTCCAC CCGCTCCGCA ACACGGGCAC GCTGGGGCTT
TCGGGCGGAT CGATCCTCGA CCTGCTGCGT CATTGGGGGC ATGATCCGGT GATCGCCCCC
ATTCCCGTTC AGGAAAGCGC ATGA
 
Protein sequence
MRGEAGLLAD LDALAIPFAA HEHEAVFTVA ESDAVNAAIP GAHTKNLFLK DSGGAFWLVT 
VPSEARVDLK ALPAAIGSKR VSFGKADAME QLLGIAPGSV TPLAAINAAP GSITVVIDAR
LAAAPIVNVH PLRNTGTLGL SGGSILDLLR HWGHDPVIAP IPVQESA