| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1821 |
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| Symbol | |
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| ID | 4082173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1919906 |
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| End bp | 1920553 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638010196 |
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| Product | cytochrome c-type biogenesis protein CcmB |
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| Protein accession | YP_616866 |
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| Protein GI | 103487305 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.17994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC TTATCGCCCT CTTCTGGCGC GACCTGCGCC GCGCGTGGGG CAGCGGGGCG
CTGTGGCTGC CGGTGCTCTT CTTCCTGCTC GTCGCGACCG CCTTTCCCTT TGCGGTTGGC
CCCGACGCGC CGCTGCTGCG CCGTGCGGGC GGCGGAATGG TCTGGGTGGC CGCGCTGCTC
GCCGCGCTGC TGCCGATCGA CCGGCTGGTG CGGCCCGACC GCGACGCGGG CGTGCTTGAT
CAGCTCGCGG TCCGCGGCTT CGCCGATGAG CTGGTCGCAG CCGTGAAGAT TGTCGCGCAC
GCGATCGCCT TTGGCATACC GCTGCTCGTC GCGCTCCTGC CCGCCTCCGC CCTGCTCGCG
CAGGACGCCG CGCGCGTCGA AACGCTTGCG ATGGGGATTG CCCTCGCGGT TCCGGCGCTC
GCGTCGCTTG CGGTGCTGAG CGCCGCGCTG ACCGCCGGTC ACAAGGGCGG GAGCGCGGTC
GGCGGGCTGC TCATACTCCC GCTCGCGGTG CCGCTGCTGA TCTTTGGCGC CGGGATGCTC
GACCCGTCGG GACGCGGCGC GATCAAGCTG CTTGCGGCGA CGAGCCTGCT GCTGACGGTG
ATCGGTCCGT TTGCGGCGGG TGCGGCGCTG CGAGGACTGC GCGAATGA
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| Protein sequence | MTALIALFWR DLRRAWGSGA LWLPVLFFLL VATAFPFAVG PDAPLLRRAG GGMVWVAALL
AALLPIDRLV RPDRDAGVLD QLAVRGFADE LVAAVKIVAH AIAFGIPLLV ALLPASALLA
QDAARVETLA MGIALAVPAL ASLAVLSAAL TAGHKGGSAV GGLLILPLAV PLLIFGAGML
DPSGRGAIKL LAATSLLLTV IGPFAAGAAL RGLRE
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