| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1804 |
|---|
| Symbol | |
|---|
| ID | 4082195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1900376 |
|---|
| End bp | 1900804 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638010179 |
|---|
| Product | Fe-S cluster formation protein |
|---|
| Protein accession | YP_616849 |
|---|
| Protein GI | 103487288 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGC CGCTGTATAA CCGCGACATC TTGGCGCTGG CGATCGCCAC CGCCGATTAT
CTGCCGAACC CCGACGCGCG ATACCGGGCG AGCAAGCGCG CGCCGCTGTG CGGCAGCGCG
ATCATCCTCG ATCTCGACAC CGACGAGAGC GGGCGCGTGG CGCGCGTCGG GCTGCACGTC
GAGGCGTGCG CGCTGGGGCA GGCGTCGGCG GCGCTGCTCG CGCGCCATGC GCCGGGGCAC
GGGCTCGCCG ACCTTTGCCG CGCGCGCGAC AGCATCGCCG GGTGGTTTGC GGGAGCCGAA
GAGCGACCCG ACTGGCCGGG GTTCGACCTC CTCGCCCCCG CGCGTGACTA TCCGGCGCGG
CACGGGGCAA TCCTGCTGCC CTTCGATGCG GCCATAGCGG CGCTCGAGGC GCGGGCGGCG
GCGGCATGA
|
|---|
| Protein sequence | MSAPLYNRDI LALAIATADY LPNPDARYRA SKRAPLCGSA IILDLDTDES GRVARVGLHV
EACALGQASA ALLARHAPGH GLADLCRARD SIAGWFAGAE ERPDWPGFDL LAPARDYPAR
HGAILLPFDA AIAALEARAA AA
|
|---|
| |