Gene Sala_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1801 
Symbol 
ID4082192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1897539 
End bp1898003 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID638010176 
Producthypothetical protein 
Protein accessionYP_616846 
Protein GI103487285 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.41183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA GCCCGATCCA CCACGCCAGC TTTTCCGTCG AACGCGCCTA TCGTTCGCCG 
CGTCAACGGG TTTTCGCCGC CTTCACCAGT GCCGAGGCGC GGCGCCGCTG GCTTGTCGAA
ACCGACGGCT GGACCGTCCA CGCCTATGAT CCGCCCGCCG AAGTCGTACC GGGCGCTGTG
GAGTCAAGCC GTTTCAGCCC GCCGGGTGCC GACGTCGTCC TGACCAATGA TACGACCTAC
CTCGATGTGG CGCCGCAGGA ACGGCTGATC TTCGCCTATG CCATGACGGT CGATGGAAAG
CCGCTGTCCT CGTCGCTCGC GACCGTCGAG TTTTTTGATG AGGGGCAGGG CGCGCGCATC
CGCTTTACCG AACAGGGCGC CTATCTCGAC GGCGATGTGG CCGGACGCGA AGCCGGAACG
CGCGAACTGC TGGACGGGCT GGCGACGGAA CTCGGCGAGG CCTGA
 
Protein sequence
MADSPIHHAS FSVERAYRSP RQRVFAAFTS AEARRRWLVE TDGWTVHAYD PPAEVVPGAV 
ESSRFSPPGA DVVLTNDTTY LDVAPQERLI FAYAMTVDGK PLSSSLATVE FFDEGQGARI
RFTEQGAYLD GDVAGREAGT RELLDGLATE LGEA