| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1785 |
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| Symbol | |
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| ID | 4082252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1884124 |
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| End bp | 1885338 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010159 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_616830 |
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| Protein GI | 103487269 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0326446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATTC AGTGGATGCG CTGCGCATCC TGTCTCATCC CTGCCACGCT GGGTGTGCTG
GCCCCGTCGC TTGCTACACC TGTTGCGGCG CAGGAACCCC TGACAGAGAG CCGTGCGATC
GCATTGGCGC TGGCGCAGGA AGGGATCGCC GGGCGCGATG ATGCCGACCG CGCTGCTGCG
GCGGCCGAGG TCGATGTGAT CGGCCCGCTC GACAATCCGC AGCTGGAATT GGCGCGCGAA
GGCGGCGGGG GTGAAACCGA ATATCAGCTC CATCTGGTGC AGCCGATCGA TCTGGTCGGC
CGCCGCGCCG CCTTGCGCGA TGCGGCGCGG GCCGACGCTG AGGCGACCGC TGCCGATATC
GAACGCCGGC GCCAGTTGAT GATCGCCGAT GTGCGCAGCG CCTATGTCCG CTGTGCGGCG
GCTTCGGCGC AGGCCGATAT CTGGCAGGCC TACATCGCCG ATGTGAACGA AGCGCTGCGG
ATTGCCACTG CGCGGGCGGA GGCGGGGGAT ACGGCGGTGT ATGACGTGCG CCGGGTGCGG
GTGCAGGCCA GCGCGGCAGA GGCCGGGCGC TTGCAGGCTG ATGGCGCGCG CCGGGCGGAT
TGCGCCACGC TGGGCGGGCT CACCGGGGTG GCTGATCCGG CGGTCGCGAT CGAGGCGATC
ACCGCGCTTG GCCAAGCCGA CACATCAGCG GGCGAACGCG CTGATCTGAT CGCGCAGCAG
CAGCGGATCA CCGCCGCCGA GTATCGGATC ACTGCGGCTG AACGCGCGCG CTGGCCGCAG
CTTTCGGTCG GTGCCGGGGT GCGCGGGCTC GATGATGGTA CGGGCACGCG ATATGGCCCG
ACCATCTCGC TTGGGGTGTC GTTGCCGCTC TGGAACGGCG GCGGTGCGGC TGTGCGGCAG
GAAGATGCAA GGCGCACTTC GCTGGAGGCG GAACTAGCCA TCGCCCGCCG CCAGATTGCC
GCCGAACAGT CCGCAGCCAG CGCGCGGCTG TCCTCCTCAC GCGCTGCTGC CGTGGCCGCC
ATTAGCGCGC GCGATGATGC CGGGCGGCTC GGCACGATAG CCAATACAGC TTACCAATCG
GGCGAAATCG GGGTCGTCGA ACTGCTCGAC GCCTACGAAG CCGCGCGCGA CGCTGACCTT
TCTGTGGTCG CTTTCGCGCT CGATGCCGCG CTGGCGGCGG TTACCTACGA TCTTACCACT
GGAAGGAGCT ACTGA
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| Protein sequence | MSIQWMRCAS CLIPATLGVL APSLATPVAA QEPLTESRAI ALALAQEGIA GRDDADRAAA
AAEVDVIGPL DNPQLELARE GGGGETEYQL HLVQPIDLVG RRAALRDAAR ADAEATAADI
ERRRQLMIAD VRSAYVRCAA ASAQADIWQA YIADVNEALR IATARAEAGD TAVYDVRRVR
VQASAAEAGR LQADGARRAD CATLGGLTGV ADPAVAIEAI TALGQADTSA GERADLIAQQ
QRITAAEYRI TAAERARWPQ LSVGAGVRGL DDGTGTRYGP TISLGVSLPL WNGGGAAVRQ
EDARRTSLEA ELAIARRQIA AEQSAASARL SSSRAAAVAA ISARDDAGRL GTIANTAYQS
GEIGVVELLD AYEAARDADL SVVAFALDAA LAAVTYDLTT GRSY
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