Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1759 |
Symbol | ndk |
ID | 4081994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1854284 |
End bp | 1854706 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638010134 |
Product | nucleoside diphosphate kinase |
Protein accession | YP_616805 |
Protein GI | 103487244 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.248736 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTCA CCCGCACCTT TTCGATCATC AAGCCCGACG CGACGCGCCG CAACCTGACC GGCGCCGTCA CCAAGATGCT GGAAGACGCG GGCCTCCGCG TCGTCGCGTC GAAGCGCATC CACATGACCC GCGAGCAGGC TGAAGGATTT TACGCGGTCC ACAAGGAACG CCCTTTCTTC GGCGAACTCG TCGAGTTCAT GATTTCGGGC CCGGTCGTCG TGCAGGTGCT CGAGGGTGAA GACGCCGTGA AGCGCAACCG CGACGTGATG GGCGCGACCA ACCCCGCCGA CGCCGCCGAA GGCACGATCC GCAAGACTTT CGCCGAAAGC ATTGAGGCCA ATTCGGTCCA CGGGTCGGAT AGCGACGAAA ATGCCGCGAC CGAAATCGCC TATTTCTTCA AGCCCGAAGA AATCGTCGGC TGA
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Protein sequence | MAVTRTFSII KPDATRRNLT GAVTKMLEDA GLRVVASKRI HMTREQAEGF YAVHKERPFF GELVEFMISG PVVVQVLEGE DAVKRNRDVM GATNPADAAE GTIRKTFAES IEANSVHGSD SDENAATEIA YFFKPEEIVG
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