Gene Sala_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1739 
Symbol 
ID4081201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1831275 
End bp1831712 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content66% 
IMG OID638010114 
ProductCheW protein 
Protein accessionYP_616785 
Protein GI103487224 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0396744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACA AACTCTATCT GATCGCGCGC ATCGCCGACA CGCGCGTCGC GCTGCGCAGC 
CGCGCGATCC ATTCGGTGGT GACTGTCGGC ACGCCGGTCG AGGTGCCCGC GGCGCCGCCG
CACGTCGCGG GGCTGTTCGC GCTGCGCAGC CGCGTTTTCA CGCTGATCGA TCCGCATGTC
GTGATCGGCC TTCCCGCGGT GCCCGTCGTC CCCGGACAGC GGGTGATCGT GATCGAGGTC
GCCGAACATG GCTATGCGCT GCTCGCCGAC GAAATCGAGG ATGTCTGCTT CATCGAGGCG
GCCGAAACGC GCATCGCCGG AAAGCTGCTT CCGGGCTGGG CGCGCGTCGC CGATGCGATG
ATCGAACATG ACGGCGCGTC GCTGCTCGTC GTCGATCCGT CGCATCTCAT TCATCTGCCC
AGCTTAAAGG CCGCATGA
 
Protein sequence
MMDKLYLIAR IADTRVALRS RAIHSVVTVG TPVEVPAAPP HVAGLFALRS RVFTLIDPHV 
VIGLPAVPVV PGQRVIVIEV AEHGYALLAD EIEDVCFIEA AETRIAGKLL PGWARVADAM
IEHDGASLLV VDPSHLIHLP SLKAA