Gene Sala_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1738 
Symbol 
ID4081200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1830824 
End bp1831198 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content60% 
IMG OID638010113 
Productresponse regulator receiver protein 
Protein accessionYP_616784 
Protein GI103487223 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0418251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAT CCTGTCTGGT CGTCGATGAC AGCAAGGTCA TTCGCAAGGT CGCGCGCCAC 
ATCCTTGAAA GCATGTCCTT TGCCGTCGAG GAAGCCGCCG ACGGGCAAGA GGCGCTGACC
TATTGCCGCG CCCATCGCCC CGATGTGATC CTGCTCGACT GGAACATGCC GGTGATGAGC
GGGATGGAGT TTCTGGGCGC GTTCAACGAC CTGGATTATG GTCATGAAGA ACGCCCGCGG
GTCGTTTTCT GCACCACCGA GAACAGCATC GACCATATCC GCGCCGCGAT CGAGGCGGGC
GCGGACGAAT ATGTGATGAA GCCGTTCGAC CGCGAAACGC TGGAAGGAAA GCTGCAGCTC
GTCGGCATCG CCTGA
 
Protein sequence
MSKSCLVVDD SKVIRKVARH ILESMSFAVE EAADGQEALT YCRAHRPDVI LLDWNMPVMS 
GMEFLGAFND LDYGHEERPR VVFCTTENSI DHIRAAIEAG ADEYVMKPFD RETLEGKLQL
VGIA