| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1727 |
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| Symbol | |
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| ID | 4081189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1816029 |
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| End bp | 1818410 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010102 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_616773 |
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| Protein GI | 103487212 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCTG CGGCACTGTC GCGGCTCGAT GTCGCCTTGC TCGCGGCGCT CGCGCTCGTC
TCGGCCGTGC TGCTGTTCTG GGCCACGGGC AGCAAGATCC TTGCCGCGGG CTTTGTTGCG
GGACTTGCGG TGGCCGCCGG CGGCGTGCTG CTGGTGCGGC GCCTGTTTCC CACCGCGGCG
GGAGGCGAAG CCGCGACACC TGACTGGACC ATGCTGCGCC AGGCCGTCAA TCACGACGAT
GTCGCGATTG CCGTCACCGA CCGCACGGGC CGCATGGTTT GCGCCAACGA CCTGTTCGCC
ACCTGGATGG GCGGTTTTGT CACACCCCCC GGCCTGCCGG TCGACGGACG CGGCGCCGAA
CTGCTCAAAA ACGCCGGGCG GACGGCGTGG CGCGATGGCG AGGGACGCGC CGATGACCTT
GCGATCGGCC CGCTGCGATT GCGCGCGCAG GTGATGCGCA CGGGGCAGGC GGAGGATTAT
CTGGTCTGGC GCTTTGCCGC GATCGAACGG TTCGATCTGG TCGCCGAACT CACGCGGCAT
CTGGGCGGTC CGGCGGGCCG GACGCTGGGC CATGCCGGGG TCATGGCGGC GCTGGTCAAC
AGCGAAGGCC GCCTTCGCGC TGCCAATGAG GCGTTTCTGC TGCGCGCACT CGGCGAGGAG
GATGCCCGCC ATTACGCCGG GCGCGATGTT GCGGCGATGT TGCGTATCGA CGATGGCGGC
GCCCTTTATT TTGCGCGCGA GGGCGACCGC GCGACGCCGG TGCGGCTGAT CCAGATCCCG
CTCGTTTCGT CCGACAGCAA TTCGCCAGTG CTGCTCGCGA TGCTCGACGA GGAGATGGGG
CCGGCCGACC GCGGCACCGC GCAAACCTAT GTCGAAACCT TGCTTTCGCT GCTGCCCTTC
GGGCTGGCGC TCGTCGACCG CGACGGACGC TTCCTTTACA TGAATCGCGC TTTCAAGCGT
GCTGCCAACC TTCCTGAAGC CAAGATGCCG CGTTATCCGG GCGACATCGT CGTCGGCGAG
GACAAGGGGC CGCTGGCCGA CATGATCCGT CGTCACAGCA GCGGGCAACA GGTCGGCGGC
GACCTGTCGA TCCGCTTGGC TGGGCAGAGC GGCGATCCGG TGTCGATGCG CGTTGTCGGG
GTGCGGGGCC TCGGCGAAGC GGCGGTGCTT TTGAGTCTCA AGGATTCGAG CGAGGAATCG
CGCCTCAAGC GCCAGGTCGC GCAGGCGTCG AAGATGCAGG CGGTGGGCCA GCTTGCGGGC
GGTGTCGCGC ATGATTTCAA CAATATCCTG ACCGCGGTGC TCGGTGCGTG CGACCTGATG
CTGATGCGGC ATACGCCGGG CGACAGCGAC TATGACGACA TCCAGCAGAT TCGCAGCAAC
GCCAATCGCG CCGCCAGCCT GACGCGGCAA TTGCTTGCCT TTTCGCGGCA ACAGACGCTG
CGACCGCAGA TATTGCAACT GCCCGACGTG ATTTCGGAGG TGTCGCATTT GTTGAAACGC
CTGATCGGCG AGACGGTGCA GCTTTCGGTG CATCACGGTC GCGGCCTCGG GGCGGTGCGC
GCCGACCCCG GCCAGCTCGA ACAGGTGATC ATCAACCTGG CCGTCAACGC GCGCGACGCG
ATGCCCGGCG GCGGGACGCT GACGATCGAA ACCTATCCGG TGTCGGCCAC CGATGTGCGC
CAGATGGGCA ATGAGTTCAT GCCACCCGCC GATTATTGCG CGCTGAAGGT CAGCGATACG
GGCACCGGCA TTCCCGCCGA CATATTGCCC AAGATTTTCG AACCCTTTTT CACGACCAAG
GATGTGGGCA AAGGGACGGG GCTCGGCCTG TCGACCGTTT ATGGCATCAT CAAGCAGTCG
GCGGGCTTCA TCTTTGCCGA CAGCAAGCCG GGAGAGGGCA CCAGCTTTAC CATCTATCTG
CCCGTCCACC GCGTCGCGGG TGACGCCCCG GCGGCGCCGC AGCCGCCCGC CAAGCCCAAA
AAGAGCCAGT GGGGCAGCGG GACGATCCTG CTCGTCGAAG ACGAGGACAT GGTGCGTGCG
GTCGCGGAAC GCGCCCTGGC CCGCGCGGGT TATACGGTCG TCACCGCCGC GCAGGGCGAG
GAAGGACTCG AACGTTTTGC CGGGATGGAG AAGGTCGATT TGGTCATCAG CGATGTCGTG
ATGCCGACGA TGGACGGGTC GGCGATGGTG CGCGCGATGC GCGCCAGGCG CCCCGGCCTG
CCGGTGCTGT TCATGTCGGG CTATGCCGAG GAACAGCTGC GCCAGTCGAT CGACATCGAC
AATGTGTCTT TCCTGCCCAA ACCCTTCTCG GTCGCGCAGC TGGCCGAGGC GACCTCGGCG
GCGCTGGACG AGGCCGCGCA TCGCGGGGGC CGGGATGGCT GA
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| Protein sequence | MPPAALSRLD VALLAALALV SAVLLFWATG SKILAAGFVA GLAVAAGGVL LVRRLFPTAA
GGEAATPDWT MLRQAVNHDD VAIAVTDRTG RMVCANDLFA TWMGGFVTPP GLPVDGRGAE
LLKNAGRTAW RDGEGRADDL AIGPLRLRAQ VMRTGQAEDY LVWRFAAIER FDLVAELTRH
LGGPAGRTLG HAGVMAALVN SEGRLRAANE AFLLRALGEE DARHYAGRDV AAMLRIDDGG
ALYFAREGDR ATPVRLIQIP LVSSDSNSPV LLAMLDEEMG PADRGTAQTY VETLLSLLPF
GLALVDRDGR FLYMNRAFKR AANLPEAKMP RYPGDIVVGE DKGPLADMIR RHSSGQQVGG
DLSIRLAGQS GDPVSMRVVG VRGLGEAAVL LSLKDSSEES RLKRQVAQAS KMQAVGQLAG
GVAHDFNNIL TAVLGACDLM LMRHTPGDSD YDDIQQIRSN ANRAASLTRQ LLAFSRQQTL
RPQILQLPDV ISEVSHLLKR LIGETVQLSV HHGRGLGAVR ADPGQLEQVI INLAVNARDA
MPGGGTLTIE TYPVSATDVR QMGNEFMPPA DYCALKVSDT GTGIPADILP KIFEPFFTTK
DVGKGTGLGL STVYGIIKQS AGFIFADSKP GEGTSFTIYL PVHRVAGDAP AAPQPPAKPK
KSQWGSGTIL LVEDEDMVRA VAERALARAG YTVVTAAQGE EGLERFAGME KVDLVISDVV
MPTMDGSAMV RAMRARRPGL PVLFMSGYAE EQLRQSIDID NVSFLPKPFS VAQLAEATSA
ALDEAAHRGG RDG
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