Gene Sala_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1717 
Symbol 
ID4081295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1807554 
End bp1808123 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content70% 
IMG OID638010092 
Producthypothetical protein 
Protein accessionYP_616763 
Protein GI103487202 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAT CCCAATCCCC GACCTGCGAC GTCGACGCGC TGATCGACGC CGTCATCGAC 
CGCGAAGGCC GATATGTAAA CCACCCCGCC GACCGCGGCG GCCCGACCTG CTGGGGGATC
ACCGAAGCGG TGGCGCGCGC CGAGGGCTAT GCCGGCCCGA TGCGCGCGAT GCCGCGCGAT
TCCGCTGCTG CCATCTATCG CCGCCTCTAT TGGCTGCGCC CCGGCTTCGA CAGGGTCGCG
CTGCGCGCGC CTGCGATCGC TGCCGAACTC TTCGACACCG GGGTCAACAT GGGCACCGCC
ACCGCGACCG GATTTCTTCA GCGCGCGCTC AACGCGCTCA ACCGCAGCGC GCGCGACTAT
CCCGACATCG CGGTCGACCG CGCCATCGGG CCGCGCACGC TGGCGGCGCT CGACGGCTTC
CTCAAGGCGC GCGGCAAGCG CGGGGAGGTC GTCCTGCTGC GTGCGATCGA GGCGTTGCAG
GGCGAACGCT ACATCGCGCT CGCCGAACGC CGCCCCAGCC AGGAGGCCTT TCTCTATGGC
TGGCTCGCTA ACCGCATCGG TGAGGCGTGA
 
Protein sequence
MPRSQSPTCD VDALIDAVID REGRYVNHPA DRGGPTCWGI TEAVARAEGY AGPMRAMPRD 
SAAAIYRRLY WLRPGFDRVA LRAPAIAAEL FDTGVNMGTA TATGFLQRAL NALNRSARDY
PDIAVDRAIG PRTLAALDGF LKARGKRGEV VLLRAIEALQ GERYIALAER RPSQEAFLYG
WLANRIGEA