| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1708 |
|---|
| Symbol | |
|---|
| ID | 4081285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1798882 |
|---|
| End bp | 1799061 |
|---|
| Gene Length | 180 bp |
|---|
| Protein Length | 59 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638010082 |
|---|
| Product | phage shock protein C, PspC |
|---|
| Protein accession | YP_616754 |
|---|
| Protein GI | 103487193 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.135953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGG GTTTTCGCAA GAATCGCCAG GGTGGCATCC TCTTCGGTGT ATGCGCCGGA
ATGGCGGACC ACTTCGGCTT CGATGTCTTG TGGACGCGCG TCGCCTTTGT CGCCCTGACG
CTCCTCGGCT TCGGCCTGCC GCTGCTGCTC TATCTGACCG TCGCGATCCT CGCGCCATAA
|
|---|
| Protein sequence | MKQGFRKNRQ GGILFGVCAG MADHFGFDVL WTRVAFVALT LLGFGLPLLL YLTVAILAP
|
|---|
| |