| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1704 |
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| Symbol | |
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| ID | 4081107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1793509 |
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| End bp | 1794906 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010078 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_616750 |
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| Protein GI | 103487189 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.162739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA GCCTGTTGCG CCGCAAATCG ATCGTCCCGG ACCAGCCGGA CGGGCGGGGA
TTGGCGCGCA CATTGGGTTG GCCGCACCTC GTTGCGCTGG GCGTCGGCGC GATCGTCGGC
ACGGGGATTT TGACGCTGAT CGGCGTCGGC GCCGACAAAG CGGGGCCGGC GGTGATCCTC
TCCTTTGCCA TCGCGGGGCT GATCTGCGCC TGCGCCGCGC TCGCCTATGC CGAAATGGCG
ACGATGATCC CGGCCTCGGG CAGCGCCTAT ACCTATAGCT ATGTCGTGAT CGGCGAAATC
ATCGCCTGGG TCGTCGGGTG GAGCCTGATC CTGGAGTATT CATTGGTGGT CAGCGCGGTC
GCGGTCGGCT GGTCGGGCTA TGCCGCGCCG CTGCTGGAGG CGTGGGCGGG GTTTCCGATG
GCGCTGATGC AGGGACCGGA ACTGGGCGGG ATCGTCAATC TGCCGGCGAT CGCGATCATC
GCCGCGGTCG CCGGGATGCT GCTCGTCGGC ACGCGCGAAA GCGCCACGGT CAATGCCATC
CTCGTGCTGG TGAAGATCGC CGCGCTTGCG GTGTTCGTGG CGGTCGCGCT GCCTGCGTTC
GACGCGGCGA ACCTCGAACC CTTCAGCCCC TATGGCTTTG CGAAGCATAT GGGCCCCGAC
GGCGTCGAGC GCGGGGTGAT GGCCGCCGCG GCGATCATCT TCTTCGCCTT TTACGGGTTC
GACGCGATCG CGACCGCGGC CGAGGAAGCG AAAAACCCCG ACCGCGACCT CAAGATCGGC
ATCGTCGGGT CGATGCTCGC CTGTGTCGCC ATCTATATCG CCGTCGCGGT CGCCGCGGTC
GGCGCGATCG CCTACACGCG CTTCGCCAAC AGCCCCGAAC CGCTCGCGCT GATCCTGCGC
GAACTGGGCA GCCCGCTCGC GGCGCAATAT CTTGCCGTCT CGGCGGTCGT CGCGCTGCCG
ACCGTGATCC TCGCCTTCTT CTATGGGCAG AGCCGCATCT TCTTCACCAT GGCGCGCGAC
GGGCTGCTCC CCGCGAGCCT GGCCAGGTTG TCGGCGCGCG GAACGCCGGT GCGCATCACC
ATCTTTACCG CGATCGTCGT TGCGATCCTC GCGGGTTTCA TCCCCCTGGG CGAGCTGGCC
GCGCTCGCCA ATGCGGGAAC GCTCGCCGCC TTTACCGCCG TGTCGATCTG TATGCTCATC
ATGCGCCGCC GCGCGCCGCA AGCGCCGCGC ACCTTCCGCG CGCCGCTGCC GTGGCTGGTC
GGAGGCATCG CGGTGTTCGG CTGCATCTAT CTTTTCTTCA GCCTGCCCGT GCAGACGCAG
ATCTGGTTCG GCATATGGAA TATGGCGGGC CTTGCCGCCT ATTTCCTCTA TGCGCGCCGC
CATGCGGTTG CCGACTGA
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| Protein sequence | MSDSLLRRKS IVPDQPDGRG LARTLGWPHL VALGVGAIVG TGILTLIGVG ADKAGPAVIL
SFAIAGLICA CAALAYAEMA TMIPASGSAY TYSYVVIGEI IAWVVGWSLI LEYSLVVSAV
AVGWSGYAAP LLEAWAGFPM ALMQGPELGG IVNLPAIAII AAVAGMLLVG TRESATVNAI
LVLVKIAALA VFVAVALPAF DAANLEPFSP YGFAKHMGPD GVERGVMAAA AIIFFAFYGF
DAIATAAEEA KNPDRDLKIG IVGSMLACVA IYIAVAVAAV GAIAYTRFAN SPEPLALILR
ELGSPLAAQY LAVSAVVALP TVILAFFYGQ SRIFFTMARD GLLPASLARL SARGTPVRIT
IFTAIVVAIL AGFIPLGELA ALANAGTLAA FTAVSICMLI MRRRAPQAPR TFRAPLPWLV
GGIAVFGCIY LFFSLPVQTQ IWFGIWNMAG LAAYFLYARR HAVAD
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