Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1696 |
Symbol | |
ID | 4081099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1787227 |
End bp | 1787835 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638010070 |
Product | TetR family transcriptional regulator |
Protein accession | YP_616742 |
Protein GI | 103487181 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.176236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCACA GCAAAGATAA CAGTGTCAAC ATAAAAGAGA GCGGCGCCAA GGCGGCGGGC GCCTATCACC ATGGCGATCT GCGCGCGGCG GTGATCGCCG CAGGGCTGAA ACGGCTGGCC GAGGGCGACG GTGGCGAATT GGGTCTGCGC GCTCTCGCAC GCGACGTCGG GGTCAGCGCC ACCGCGCTTT ACCGCCATTT CCCCGACAAG GAGGCGCTGC TTGACGCGCT CGCCGACGAA GGGTTGCGGC GGCTGGGTGC GCTCCAGGCG CAGGCGTGGC TGAAGGCAGG AGGTGGCGTT GCGGGCTTCA AGGCGACGGG CATCGCCTAT GTCCGCTTCG CCCACGACGA ACCGGCGCTG TTCCGGCTGA GTTTCACGCG CCAGATGAGT CAGCGAAGCA TGGGCAGCGA TGGCGGCGAG GTGGCCTATA ATCTGCTTCG TGCCGGGGTC GGCGAAGCGC TGCCTGGCGC CGCCGATCCC GACACGGCGG CGCTCCACGC CTGGGCGCTG GTACATGGGC TGGCAATGCT GATCCTCGAC CGGCGGATCG AATGGGATGA GGCGCGCGTC GCCGAAGTCG TCGGCCTGAC CTTTGGCGGC GTGGGGTGA
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Protein sequence | MMHSKDNSVN IKESGAKAAG AYHHGDLRAA VIAAGLKRLA EGDGGELGLR ALARDVGVSA TALYRHFPDK EALLDALADE GLRRLGALQA QAWLKAGGGV AGFKATGIAY VRFAHDEPAL FRLSFTRQMS QRSMGSDGGE VAYNLLRAGV GEALPGAADP DTAALHAWAL VHGLAMLILD RRIEWDEARV AEVVGLTFGG VG
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