| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1696 |
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| Symbol | |
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| ID | 4081099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1787227 |
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| End bp | 1787835 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010070 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_616742 |
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| Protein GI | 103487181 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.176236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCACA GCAAAGATAA CAGTGTCAAC ATAAAAGAGA GCGGCGCCAA GGCGGCGGGC
GCCTATCACC ATGGCGATCT GCGCGCGGCG GTGATCGCCG CAGGGCTGAA ACGGCTGGCC
GAGGGCGACG GTGGCGAATT GGGTCTGCGC GCTCTCGCAC GCGACGTCGG GGTCAGCGCC
ACCGCGCTTT ACCGCCATTT CCCCGACAAG GAGGCGCTGC TTGACGCGCT CGCCGACGAA
GGGTTGCGGC GGCTGGGTGC GCTCCAGGCG CAGGCGTGGC TGAAGGCAGG AGGTGGCGTT
GCGGGCTTCA AGGCGACGGG CATCGCCTAT GTCCGCTTCG CCCACGACGA ACCGGCGCTG
TTCCGGCTGA GTTTCACGCG CCAGATGAGT CAGCGAAGCA TGGGCAGCGA TGGCGGCGAG
GTGGCCTATA ATCTGCTTCG TGCCGGGGTC GGCGAAGCGC TGCCTGGCGC CGCCGATCCC
GACACGGCGG CGCTCCACGC CTGGGCGCTG GTACATGGGC TGGCAATGCT GATCCTCGAC
CGGCGGATCG AATGGGATGA GGCGCGCGTC GCCGAAGTCG TCGGCCTGAC CTTTGGCGGC
GTGGGGTGA
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| Protein sequence | MMHSKDNSVN IKESGAKAAG AYHHGDLRAA VIAAGLKRLA EGDGGELGLR ALARDVGVSA
TALYRHFPDK EALLDALADE GLRRLGALQA QAWLKAGGGV AGFKATGIAY VRFAHDEPAL
FRLSFTRQMS QRSMGSDGGE VAYNLLRAGV GEALPGAADP DTAALHAWAL VHGLAMLILD
RRIEWDEARV AEVVGLTFGG VG
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