Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1693 |
Symbol | |
ID | 4081096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1783430 |
End bp | 1784266 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638010067 |
Product | hypothetical protein |
Protein accession | YP_616739 |
Protein GI | 103487178 |
COG category | [S] Function unknown |
COG ID | [COG3777] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.612367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGATT ATTCCGCCTG GATCGGCCGC GGTGAAACGC GCGAGGATGT CGCGACTGCG GTGCCGATCG AAGGCCTCGC CGCTCTGCTC GACCACGACG CGCCGCCATG GGTGCCCGGC ATGGTGCCAC CGCTCGGGCA CTGGCTCTAT TTCCTGCCGA CCGCGCGCCA GTCAACGATT GGCGAGGATG GACACCCCCG CCGCGACGGG CACGGCCTGC TGCCGCCCGT GCCGCTCCCT CGCCGCATGT GGGCGGGCAG CCGCATCGAT TTCCTCTCCC CCATTCCCAT CGGCGCGGCG CTGACGCGCG TGACGACGAT CGATGCGATC AGGCCCAGAC GCGGCGCGAG CGGCGATCTT CTGTTCGTGA CGCTTCGGCA CGAGATATCG GCAAATGGCG TCGCCGCGAT CCGCGAAGAA CAGGATATCG TGTTTCGCGA GGCCGCAAGC GCGGCACCGG TCCCCGCCGC CACGCCCCCG GCTGCCGCCG CCCCCGAACC CGCCGATACC GTCCGCAGCA TCATGCCCGA CCCTGTGCTG CTCTTCCGTT ATTCGGCGCT GACCTTCAAC GCGCACCGCA TCCATTATGA CCGCGACTAT GCAGTGGGTG TCGAGGGTTA TGCCGGGCTC GTCGTCCACG GCCCGCTCAT CGCGACGCTG CTGATGGATC ATGCCCTGCG CGCCGGGCTG TCCCCCCGCA CCTTCGCTTT CCGCGCCGAG GCGCCGCTCA CCGACGGGGC GCCGTTCGAT CTCTGCCTCG CGTACGACGC CGACGGTGCG CGGCTATGGG CGCGCAATTC CGCCGGACGC CGCACGATGC ACGTCAGCCT GACCTGA
|
Protein sequence | MDDYSAWIGR GETREDVATA VPIEGLAALL DHDAPPWVPG MVPPLGHWLY FLPTARQSTI GEDGHPRRDG HGLLPPVPLP RRMWAGSRID FLSPIPIGAA LTRVTTIDAI RPRRGASGDL LFVTLRHEIS ANGVAAIREE QDIVFREAAS AAPVPAATPP AAAAPEPADT VRSIMPDPVL LFRYSALTFN AHRIHYDRDY AVGVEGYAGL VVHGPLIATL LMDHALRAGL SPRTFAFRAE APLTDGAPFD LCLAYDADGA RLWARNSAGR RTMHVSLT
|
| |