Gene Sala_1693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1693 
Symbol 
ID4081096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1783430 
End bp1784266 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content69% 
IMG OID638010067 
Producthypothetical protein 
Protein accessionYP_616739 
Protein GI103487178 
COG category[S] Function unknown 
COG ID[COG3777] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.612367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATT ATTCCGCCTG GATCGGCCGC GGTGAAACGC GCGAGGATGT CGCGACTGCG 
GTGCCGATCG AAGGCCTCGC CGCTCTGCTC GACCACGACG CGCCGCCATG GGTGCCCGGC
ATGGTGCCAC CGCTCGGGCA CTGGCTCTAT TTCCTGCCGA CCGCGCGCCA GTCAACGATT
GGCGAGGATG GACACCCCCG CCGCGACGGG CACGGCCTGC TGCCGCCCGT GCCGCTCCCT
CGCCGCATGT GGGCGGGCAG CCGCATCGAT TTCCTCTCCC CCATTCCCAT CGGCGCGGCG
CTGACGCGCG TGACGACGAT CGATGCGATC AGGCCCAGAC GCGGCGCGAG CGGCGATCTT
CTGTTCGTGA CGCTTCGGCA CGAGATATCG GCAAATGGCG TCGCCGCGAT CCGCGAAGAA
CAGGATATCG TGTTTCGCGA GGCCGCAAGC GCGGCACCGG TCCCCGCCGC CACGCCCCCG
GCTGCCGCCG CCCCCGAACC CGCCGATACC GTCCGCAGCA TCATGCCCGA CCCTGTGCTG
CTCTTCCGTT ATTCGGCGCT GACCTTCAAC GCGCACCGCA TCCATTATGA CCGCGACTAT
GCAGTGGGTG TCGAGGGTTA TGCCGGGCTC GTCGTCCACG GCCCGCTCAT CGCGACGCTG
CTGATGGATC ATGCCCTGCG CGCCGGGCTG TCCCCCCGCA CCTTCGCTTT CCGCGCCGAG
GCGCCGCTCA CCGACGGGGC GCCGTTCGAT CTCTGCCTCG CGTACGACGC CGACGGTGCG
CGGCTATGGG CGCGCAATTC CGCCGGACGC CGCACGATGC ACGTCAGCCT GACCTGA
 
Protein sequence
MDDYSAWIGR GETREDVATA VPIEGLAALL DHDAPPWVPG MVPPLGHWLY FLPTARQSTI 
GEDGHPRRDG HGLLPPVPLP RRMWAGSRID FLSPIPIGAA LTRVTTIDAI RPRRGASGDL
LFVTLRHEIS ANGVAAIREE QDIVFREAAS AAPVPAATPP AAAAPEPADT VRSIMPDPVL
LFRYSALTFN AHRIHYDRDY AVGVEGYAGL VVHGPLIATL LMDHALRAGL SPRTFAFRAE
APLTDGAPFD LCLAYDADGA RLWARNSAGR RTMHVSLT