Gene Sala_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1634 
Symbol 
ID4080712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1715966 
End bp1716766 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID638010007 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_616680 
Protein GI103487119 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00873489 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.786004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATATG AAACCATCCT GGTCGACGTC GCCGATCATA TCGCGACGAT CACGCTCAAC 
CGGCCCGAGG CGCTGAACAG CTTCACGCGG CAGATGATGG CCGAATTCGA GCATCTGTGG
AAGCGGGTCG CGCGTGACGA CAGCATCCAT TGCTGCGTGC TGCGCGCTGC CCCCGGAAAG
GCATGGTGCA CCGGCGTCGA CGTCAAGGAA TCGCAGAAGC CGGGACAGGC GGTCGTCGAT
CTCGATAACA TCTGGCATTG CGAAGATCCC GGCATCTATC TCGGCCCCAA GTCGATGAAC
TGCTGGAAGC CGGTGGTCGC GGCGGTCCAC GGCATGGCGG CTGGCGGCGC CTTTTATTGG
CTCAACGAGA GCGACATCAT CATCTGCTCC GAAGACGCGA CTTTCTTCGA TCCGCACGTC
ACCTATGGCA TGACGAGCGC ACTCGAACCG ATCGGCATGA CCTATCACAT GCCGCTCCAT
GACGTGCTAC GCATGGTGCT GCTCGGCAAC GACGAGCGGA TCGGCGCGGG GACCGCGCTG
CGCATCGGGC TGGTCAGCGA GATCGTGCCG CTGGGCGAGT TGTGGCCGCG CGCACACGAA
CTCGCCGCCG CCATCGCCGC GAAGCCCCCG GCAGCGACGG CGGGGTCACT CAAGGCGATC
TGGCAATCGC TCGACCTTCC CCGCTCGGTC GCGCTGCAGC AGGCGCTCAA ATATTGCCAG
ATCGGCAATC CGGCGGGCGT ACCGCAGGTC GACCGCGCCG CCCTGATGGC CGACAAGGCC
AAGAAGTTCA CCATTCGCTG A
 
Protein sequence
MQYETILVDV ADHIATITLN RPEALNSFTR QMMAEFEHLW KRVARDDSIH CCVLRAAPGK 
AWCTGVDVKE SQKPGQAVVD LDNIWHCEDP GIYLGPKSMN CWKPVVAAVH GMAAGGAFYW
LNESDIIICS EDATFFDPHV TYGMTSALEP IGMTYHMPLH DVLRMVLLGN DERIGAGTAL
RIGLVSEIVP LGELWPRAHE LAAAIAAKPP AATAGSLKAI WQSLDLPRSV ALQQALKYCQ
IGNPAGVPQV DRAALMADKA KKFTIR