Gene Sala_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1624 
Symbol 
ID4081897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1702995 
End bp1703732 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID638009996 
Producthypothetical protein 
Protein accessionYP_616670 
Protein GI103487109 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.707907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.49317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC AGGCAATCCT TCATCGCATG GTCATGCCGG GGCACATCTG CCCCTATGGC 
CTCAAAGCCA AATATCTGCT CGAGCGCCGC GGCTATAGAG TCGACGACCG CTGGCTGACG
ACGCGCGAGC AGACCGATGC GTTCAAGGCG CAGCATGGCG TCCAGACGAC GCCGCAGACC
TTCATCGACG GGGTGCGGAT CGGCGGTTAT GACGATCTGC GCCGCCATTT CGGGCTGAAG
GTCGCCGACC CCGATGCGGC CAGCTATACG CCCGTGATCG CGCTGTTCGC GATGACCGCG
CTGATGGCGC TGGCGGCGAG CTTTGCCGCC TATGGCGATG CCTTTACGCT TCGCGCCGCC
GAATGGTTCA TCTCTTTCAG CATGATGGTG CTCGCGCTGC TGAAATTGCA GGATGTGGGC
AGGTTCGCGA CGATGTTCCT CAATTACGAC CTGCTCGCGC GCCGCTGGGT TCCCTATGCG
AGCATCTATC CCTTTGCCGA GGGGCTGGCG GGCGTGTTGA TGACCGCGCA CGCGCTGCCC
TGGCTGTCGA TCCCGCTGGC GCTGTTTATC GGCGGCATCG GCGCGGTGTC GGTGTTCAAG
GCGGTCTATA TCGACCGGCG CGACATCAAA TGCGCGTGCG TCGGCGGCAG CAGCAAGGTG
CCGCTGGGCT TCGTGTCGCT GACCGAAAAT CTGATGATGG TCGCGATGGC GCTGTGGATG
GCGCGCATGT GGGTGTGA
 
Protein sequence
MTKQAILHRM VMPGHICPYG LKAKYLLERR GYRVDDRWLT TREQTDAFKA QHGVQTTPQT 
FIDGVRIGGY DDLRRHFGLK VADPDAASYT PVIALFAMTA LMALAASFAA YGDAFTLRAA
EWFISFSMMV LALLKLQDVG RFATMFLNYD LLARRWVPYA SIYPFAEGLA GVLMTAHALP
WLSIPLALFI GGIGAVSVFK AVYIDRRDIK CACVGGSSKV PLGFVSLTEN LMMVAMALWM
ARMWV