| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1607 |
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| Symbol | |
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| ID | 4082759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1685734 |
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| End bp | 1686612 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009976 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_616653 |
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| Protein GI | 103487092 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.771332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC TTCCTCCCCT CAGCAGCATG GAAGCCTTTC TCGAGGTCGC CCGCCACGGC
ACGGTCAAGG CGGCCGCCAT CGAGCTCGGC CTGTCGATGC CCGCGCTGTC GCGCCGAATC
CAGACGCTCG AACATGCGGT CGGACGCCCG CTTTTCAACC GCCACCATCA TGGACTCAGC
CTGACCGAGA CGGGGCGGAC ACTGCAAGCC CAGCTCTCTC CCATCCTCGA CGAGCTGCGC
GCGGTCATCG CGCAGGCGGG CAGCCCCGAC GCCTCGCTGC GCCTGCACCT CAACGTCCTG
CCGCTCTTCG CCCAACAGCG GCTGTTCCCG CGCCTGCCCG AACTGCGACG CCAGCATCCC
GAACTGCATA TCGACATCGA CACCATGTCG CATGCCGAGG CGCGGCTGGG CGACGGCATC
GACGCGGCGA TCGCGCTCGC GCGCTCAATC GATCCGGCGC TCTATGCGGC GCGGCTGGAC
CAGGACAAGG TATTCCCGAT CGCGGCGCGC ACGCTGACCG ACGGCGACCG GCCGATCACC
GTGCCCGAAC AATTGCAGCG GATGACCGTG CTTTTGCACC GCGAAATGCC CGAAACCTTC
ACCGAATGGA AAAAGGCGAT CGGCATGACC TATCTCGAAC CCGCGGGGAT CGACTATTTC
GATTCGGGGC CGCTGATGCT CGAGGCGGCG GCGCAGGGCA TCGGCATCGC CTTCATGCAC
GGCCACCATT TCGACGACGC GCACGACCCG CGGCTCGTCC GCCTGTTCGA CTATGACGTG
GACAGTCCCT ACAGCTACTG GTTCGTCTGC CGCCCGCGCG CGCTTCGCCA GCCGGCGGTC
AAATTGTTCC ACGACTGGCT GCTCGCAGCG AGAATCTGA
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| Protein sequence | MPRLPPLSSM EAFLEVARHG TVKAAAIELG LSMPALSRRI QTLEHAVGRP LFNRHHHGLS
LTETGRTLQA QLSPILDELR AVIAQAGSPD ASLRLHLNVL PLFAQQRLFP RLPELRRQHP
ELHIDIDTMS HAEARLGDGI DAAIALARSI DPALYAARLD QDKVFPIAAR TLTDGDRPIT
VPEQLQRMTV LLHREMPETF TEWKKAIGMT YLEPAGIDYF DSGPLMLEAA AQGIGIAFMH
GHHFDDAHDP RLVRLFDYDV DSPYSYWFVC RPRALRQPAV KLFHDWLLAA RI
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