Gene Sala_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1597 
Symbol 
ID4083034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1673683 
End bp1674624 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content65% 
IMG OID638009966 
Producthypothetical protein 
Protein accessionYP_616643 
Protein GI103487082 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.214914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATGC GTCAGATCTT TTTCCTGGGA ACGGCAGCGA TCGGGCTCGC CGCAACGATG 
CCCGCCGCGG CGCAGGACGC GGCGCTCGGC AAGCGCGTCG AGCGGCTCGA AAAGGAAATG
CGCGCGGTCC AGCGCACCGT TTTTCCCGGC GGCAACCCGA CCTTTTTCGA GGGCGAGATC
GCGCCCGACA ACACGCCCGG CGAACGCGCG CGCGCCAATG CGCCGGTGAT CGACCTGACC
GCGCGCGTCG ACGCGCTCGA AACGCAGTTG CAGGCGCTCA CCGGCCAGAC CGAGCAAAAT
GCTTTCCATC TGCGCGAACT CGAAAAGCAA TTTGCCGCCT ACAAGGCCGA AATGGACAAG
CGCCTTGCCG ATCCAGCGGC AAGCGAAGAC ACGCCAACCC CTGCCAGCCT TGCACCGACG
GTCAAGGCGC CCGCGGCGAC CGCAGCGGTC GCAACCCCCA CAACCAGACC GGCGAGCAAG
CCGGGGGCCA AGCCCGCCGG ACCCGACGCC GCCCGGCTCG CGCTCGTCAA GGCGGTCGAG
GTTCCGGCAA CGGGCAACGA GACCAAGGAC GCCTATGACT ATGGCTATCG GCTTTGGGAC
GCCAAGCTCT ATCCCGAGGC GCAGGCGCAA TTGAAAAGCG TCGTCGCCAA ATGGCCGCAA
AGCAGCTATG CGAGCTTTGC GCAGAATCTG CTTGGTCGCG CCTATCTCGA CGAAGGCAAG
CCCAGCCTTG CCGCGGTCGC CTTCTACAAT AATTACAAGG ATCGCCCAAG TGGCCCGCGC
GCGCCGCACA GCCTGATGTA CATGGGCGTC GCGCTCGACA GGCTCGGTCG CAAGGCCGAC
GCCTGCAAGG CGTTCCGCGA ACTCGACGAA GTCTATGGCG ACAAGGCGCC GCAGGATGTC
CGCACCGATG CTGCCGCCGC AAAAGCAAAA GCCGGCTGTT GA
 
Protein sequence
MRMRQIFFLG TAAIGLAATM PAAAQDAALG KRVERLEKEM RAVQRTVFPG GNPTFFEGEI 
APDNTPGERA RANAPVIDLT ARVDALETQL QALTGQTEQN AFHLRELEKQ FAAYKAEMDK
RLADPAASED TPTPASLAPT VKAPAATAAV ATPTTRPASK PGAKPAGPDA ARLALVKAVE
VPATGNETKD AYDYGYRLWD AKLYPEAQAQ LKSVVAKWPQ SSYASFAQNL LGRAYLDEGK
PSLAAVAFYN NYKDRPSGPR APHSLMYMGV ALDRLGRKAD ACKAFRELDE VYGDKAPQDV
RTDAAAAKAK AGC