Gene Sala_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1555 
Symbol 
ID4082725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1621163 
End bp1621429 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content64% 
IMG OID638009924 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_616601 
Protein GI103487040 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCC GCCGGCGCGA CGAGGCCGAA CTCGGCGACC ATGACGCAGC GGTCGGGGCA 
AAGGACGAGG CGGTCCACGC GCGGTTCAGC ATCGACCGGC TGATGACATT GGTGCCACCC
GGCCAGGCGC AGGCGATCAC CCTCGTCAAG ATCGAGGGCG CGTCGATCGC CGAAGCATCG
CAAATCTGTG GCCAGAGCAA GTCTCTGGTC AAGGTCAACA TTCACCGCGG CCTCAAAAAG
CTCACGCAAC TGGTTGAACG TGGATGA
 
Protein sequence
MLRRRRDEAE LGDHDAAVGA KDEAVHARFS IDRLMTLVPP GQAQAITLVK IEGASIAEAS 
QICGQSKSLV KVNIHRGLKK LTQLVERG