| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1553 |
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| Symbol | |
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| ID | 4082723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1619856 |
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| End bp | 1620863 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638009922 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_616599 |
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| Protein GI | 103487038 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGACGC TGATTACGGG CGCTGCCGGA TTCATCGGGA TGCAGGTCGC GGCGGCTTTG
CTTCGCCGCG GTGAGGCGGT TGTCGGGATC GACAATTTCA CGCCCTATTA TTCGGTCGAA
CTCAAGCGCG CGCGCGTCGC GCGGCTCGAC GCCGGTTTTG GTGGCCTGTT CACCTTCATC
GACGGCGATT TTGGTGACGC TGCGGCGCTC GCCGGTGCGC TGGCGGGCCA AAGGATCGAC
CGGATCGTCC ATCTTGGTGC CCAGCCCGGC GTGCGCTATT CGCTCGAAAA TCCGGCGGCA
TATGTCCATT CCAACATCGC GGGGCACGTC AACATCCTCG AACTTGCGCG ACATCGTGCG
GTTTCGCATC TTGTCTATGC CTCCTCCTCG TCGGTCTACG GCATGCGCGC CGACACGCCC
TTTCGCGTCG CCGACCGCGC CGATACGCCG ATTTCGCTCT ACGCGGCGAC CAAGCGTGCC
GACGAATTGC TGAGCGAAAC CTATGCGCAT CTGTTCCGCA TTCCCCTGAC CGGCCTTCGC
TTCTTCACCG TCTATGGCCC GTGGGGTCGC CCCGACATGG CGGTGTGGAA ATTTACCGAG
GCGGTGCTGC AAGGTCGACC GATAGACGTC TATAATCACG GCGATATGCG CCGCGATTTC
ACCTTTGTCG ACGATATTGT GAACGGCGTC GTCCTCGCGC TCGACCACCC GCCCGCCGAC
GATCATCGCG AGAAGCCGGG CGGCTTCACG ACCCCGCACC GGCTATACAA TATCGGCAAC
AACCGGTCGG AAAGGCTGAC CGACATGATT GCCATCATCG AACAGGCGTG CGGGCGCAAG
GCCGAGCTCA ACCTGCTGCC GATGCAGGCG GGCGACGTGT ACCAGACCGC AGCCGATATC
GACGACATCC AGCGCGACCT CGGCTTTGCG CCGACGACGC CGATTTCGGT CGGTATCCCC
GCCTTTGTCG ACTGGTATCG AACCGACTGG CTGTCGCGAA AGGCATAG
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| Protein sequence | MSTLITGAAG FIGMQVAAAL LRRGEAVVGI DNFTPYYSVE LKRARVARLD AGFGGLFTFI
DGDFGDAAAL AGALAGQRID RIVHLGAQPG VRYSLENPAA YVHSNIAGHV NILELARHRA
VSHLVYASSS SVYGMRADTP FRVADRADTP ISLYAATKRA DELLSETYAH LFRIPLTGLR
FFTVYGPWGR PDMAVWKFTE AVLQGRPIDV YNHGDMRRDF TFVDDIVNGV VLALDHPPAD
DHREKPGGFT TPHRLYNIGN NRSERLTDMI AIIEQACGRK AELNLLPMQA GDVYQTAADI
DDIQRDLGFA PTTPISVGIP AFVDWYRTDW LSRKA
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