| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1455 |
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| Symbol | |
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| ID | 4081266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1505446 |
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| End bp | 1508568 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009820 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_616501 |
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| Protein GI | 103486940 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.212874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA CGACACAGAG CCGCTGGGTG CGCCAGAGCA GCCGGATCGC GCTGATCGTC
GCGGCCGGAA TGGCGGCCAC GATGGCACGG GCGCAGGACG CCGCGCCACA GGACGACAAT
GCGCAGGCCG CCGAGGAAAT TGTCGTCACC GGATCGAACA TCAAGGGCGC ATCGGACAGC
GGCGCGATCG CGGTCACGAC GCTGGGCAAG GAAGAGATTG AGAGCTTCGG CGCCAGCTCG
ACCGGCGAGA TCATGGAATA TATCGCGCAG GCCGGCTCGG CGGAGATCAA CGGCGCCGCC
GACGGGCCGA ACGATGCGCG CGGCGACGTC GCGACGGTCA ACCTGCGCGG TCTCGGCACC
GGCAACACGC TGATCCTGCT CAACGGCCGC CGCATCGCGG CGCATGCCGC AAATCAGGAC
ATCGGATCGA CGCCGCGCCA GATCGTCAAC GTCAACGCCT TTCCAGCGAC GGGCATCGAC
CGTGTCGAGG TACTGCGCGA CGGCGCTTCG GCGCTTTACG GGTCGGATGC GACGGCGGGG
GTGGTCAACA CGATCCTCGA TGCCGATTTC AGCCGCAACA TTCTGAGCTT CGAATATAGC
AAACTCGAAG GGACCGGGTC GGACGAGATC AGCATCGACG GCGGCTTTGG CGTCGAGTTC
AACAAGGGGC GCACGCGCCT GATGCTGTCG GGCAGCTATT ATGACCGCAA CGGATTGTTT
TCCAGCGAGC TTGGCCCGCA ATTCAATTCG GTCGACAAGC GCGCCTTCCT GGGCGATTCG
CCCTTTGCGA CCGAAACCAC CGACTTTCGC AATACCTCGA CCTCGTCGCC TTTCGGGCAG
TTTCAGGTCG GATCGGTCAA TGCGGACGGC GTGTTCGTCG GTCGCCGCGT GCGTCAGGGC
ACAACGGCGC TCACCAGCTC GAGCGGCGTG TTCCATATCC AGCCGTGCGA TTTTCCGGGC
ACCCGCGCCG AACTTGGCAC GGGCAGCGAG GGCTGCATGG GGCTCGACGA CGGCTCGCTC
GACACGGCGT TGCGCTATGA TTTCGGGGCG AACCAGCCGA ACAATTCGCT GAATGAAGGC
GTCAACATCG CCAACGACCC GGTGACGGCA AAGGGACGCC AGTTGATTTC GTCGGCGAGG
CGTTACAACG CCTATGCCAA TATGGAGCAT GAGTTCGAGG GCGGCGTCGA GCTGTTCGCC
GAGGCGCTCT ATTACCGTGC GACGACCAGC TCGAACCGCG CCGCGCAACC CGTCGACAGC
GGGCTCGCCT TCCTGATCGT CCCGGCCAGC AATTATTGGA ACCCTTTTGG CGCGGTGGGC
AGCCCGAACC GTCTGCCCGG CCTCAACACC AGCGACGTTC CCGCCGAAGG CCGTGACATC
CTGCTCGTCA ACTGGCGACC GACCGATCTT GGCCCGCGCT TTATCGACAC GCAGACCGAA
ACCTATCGCC TGCTCGCCGG GCTGCGCGGC CAGTTCGGGA GTTGGGACTG GGAAGGCGCG
GTGGCGATGA GCGGCAACCG CACCGAAGAC ACCGAGAGCA ACCGCCTGTC GAAAACCCTG
CTCGTGGCGG AACTGGCGAA ATCGACGCCC GACGCGATCA ACCCTTTCGG CGGCCCCAAC
GCCAACACGC AGGAGCAATG GGACCGGGTG CGGATTTCCA ACACCAATGT CGGCACGACC
GAATTGATGA CCGCCGATTT TCGCGTATCG AACAGCGACG CCTTCGACCT GATCGACGGT
CCCGTCGGGC TCGCCTTCGG GGTCGAGTGG CGACACGACT ATTATGAAGA GGATCGCGAC
CCGCGGCTCG ACGGGACGAT CATTTTCGAT GAATCGAACG TTTCCGGCGT GTCCGACGTC
GTCGGGGTCA GCCCGACGCG CGATTCGAGC GCGGGGCGCG ACGTCTTTTC GGCCTTTGGC
GAGGCATTGA TTCCGCTGCA CCGCGGTGAG GGCACCTTCA TCAACGACCT GACGCTGCAA
CTTGCGGTGC GCGGCGAGTA TTTCAACGAC ATCAAGGACG GGGCGGTAAA GCCCAAGGTC
GCGCTGTCGT GGTTCCCGGT CGAGGCGTTC AATCTGCGCG CTGCCTATTC GCAGGGCTTT
CGCGTCCCCA ACCTCGTCCA GCTCAACCGC GGCGACATCT CGCGGCTCAA TCTGGGGACC
GAGGATTATT ACCGCCGCGA CGTGACGGGG GACCCGGTAT CGACCGGCGA CGCCTATCTG
GCCTCGGTCC GCCAGTCGAA CCCCGATCTG AAGAACGAAG ATACCGAAAC CTTTGTCGTG
GGGGCGACGC TCGACCTGAC CAAGGCGTTT GAAAGCAACA TTTTCCGGCG CTTTGCGATC
AACGTCGATT ATTGGCGTTT CGAGCAGACG GGCGTGATCG GCGCCTTTGG CGATCAGGAA
GCGCTCGCGC TCGATTTCCT GCTGCGCCAG CAGGGGTCGA GCAATCCCAA CGTCGTCCGC
GCGCCGGTGA CCGCCGCCGA CCAGGCCGCC TTCGACGCCT ATAATGCCGC CAATCCCGAC
GCGCCGCGGC AGGCGGCGGG GCAGGTGCAG TTCATCGTCG ATCCCTATAT CAATCTCGAC
AGCCAGGTGG CCGACGGCTT CGATTTCGGC CTGTCGACCA GCATCGACGC GGGATCCGCT
GGAACCTTCC GCTTCGGGGT GGAGGCGACC TATCTCAACA AGCTCGATGT CGTGCGCAAC
GACCTGCTCG CGGCGCTCGC CCAGAACCCT GCCTTTGCGG GCGACTTTGC CGAGTTGCAG
GTCGATCGCG TCAAGCTCGA CGGCAACCCG CGCTGGCGCG GCACCGCGAC CTTCGGCTGG
CGGCTCGACG ATTTCAGCAT GGGCGGATCG GTGCGCTATG TGTCCGACAT GATCGACACC
AGCGCCGACA TCACCGTCGA TGGCGAAACC GTCTATTGGA AGGTCAAGGA GGATTGGCGC
GTCAATCTTC ATGGCGAATA TCGCTTCCGC CTCGGCGGCC GCCGCGACGT GCGGCTGCGC
CTCGGCGTCA ACAACGTCTT CGACAGCGCG CCGCCGCTTG TCGATGAAAG CCTGGGCTAT
TACCCCGAAT ATCATTCGGT TAAGCCGCGG GAGTTCTATG TCCAGCTTCG GGGCAGCTTT
TGA
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| Protein sequence | MIKTTQSRWV RQSSRIALIV AAGMAATMAR AQDAAPQDDN AQAAEEIVVT GSNIKGASDS
GAIAVTTLGK EEIESFGASS TGEIMEYIAQ AGSAEINGAA DGPNDARGDV ATVNLRGLGT
GNTLILLNGR RIAAHAANQD IGSTPRQIVN VNAFPATGID RVEVLRDGAS ALYGSDATAG
VVNTILDADF SRNILSFEYS KLEGTGSDEI SIDGGFGVEF NKGRTRLMLS GSYYDRNGLF
SSELGPQFNS VDKRAFLGDS PFATETTDFR NTSTSSPFGQ FQVGSVNADG VFVGRRVRQG
TTALTSSSGV FHIQPCDFPG TRAELGTGSE GCMGLDDGSL DTALRYDFGA NQPNNSLNEG
VNIANDPVTA KGRQLISSAR RYNAYANMEH EFEGGVELFA EALYYRATTS SNRAAQPVDS
GLAFLIVPAS NYWNPFGAVG SPNRLPGLNT SDVPAEGRDI LLVNWRPTDL GPRFIDTQTE
TYRLLAGLRG QFGSWDWEGA VAMSGNRTED TESNRLSKTL LVAELAKSTP DAINPFGGPN
ANTQEQWDRV RISNTNVGTT ELMTADFRVS NSDAFDLIDG PVGLAFGVEW RHDYYEEDRD
PRLDGTIIFD ESNVSGVSDV VGVSPTRDSS AGRDVFSAFG EALIPLHRGE GTFINDLTLQ
LAVRGEYFND IKDGAVKPKV ALSWFPVEAF NLRAAYSQGF RVPNLVQLNR GDISRLNLGT
EDYYRRDVTG DPVSTGDAYL ASVRQSNPDL KNEDTETFVV GATLDLTKAF ESNIFRRFAI
NVDYWRFEQT GVIGAFGDQE ALALDFLLRQ QGSSNPNVVR APVTAADQAA FDAYNAANPD
APRQAAGQVQ FIVDPYINLD SQVADGFDFG LSTSIDAGSA GTFRFGVEAT YLNKLDVVRN
DLLAALAQNP AFAGDFAELQ VDRVKLDGNP RWRGTATFGW RLDDFSMGGS VRYVSDMIDT
SADITVDGET VYWKVKEDWR VNLHGEYRFR LGGRRDVRLR LGVNNVFDSA PPLVDESLGY
YPEYHSVKPR EFYVQLRGSF
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