| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1397 |
|---|
| Symbol | |
|---|
| ID | 4081753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1452212 |
|---|
| End bp | 1452970 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638009763 |
|---|
| Product | SAM-dependent methyltransferase |
|---|
| Protein accession | YP_616444 |
|---|
| Protein GI | 103486883 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.404398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGCAC CGGCATTGCC GGAAAGCGAA TGGGCGGCGG CCGATGGTGA GTTTGTGCCC
GCATCGGACG AGGACGGCGG CGGCCGCTGG TATTTTCACA AACCCGTGCC CGCCGAGGGC
TGGCCGCTGG CGTGGCGTGA GGCGCGCTTC ACCGCGTCCT GCACGCCATT CCGCCATCTG
GGTTTCTTTC CCGACATGGC GCCCGTGTGG GACTGGCTGC GCGAACGCAT CGCGGACAGG
CCCGACCCCG CCTTCCTCAA CCTTTTCGGC TACACCGGCG TCGGCAGTCA GGCGCTCGCC
GCGGCGGGGG CATCGGTCAC CCATGTCGAT GCGTCGAAAA AGTCGGTGGC GCAGGCGCGC
GACAATGCGG CGCTTGCCGG CATGGCCGAC AAGCCGGTGC GCTGGCTCGT CGACGATGCG
GGCAAGTTCA CCGCGCGCGA GGTGCGGCGC GGGCGGCGCT ACGATGCGAT CCTGCTCGAT
CCCCCCAAGT TCGGGCGCGG CCCGAACAAT GAACGCTGGC AGATCGAGGA AGGGCTGGCG
CCGCTGCTCG CCGATTGCCG CCAGTTGCTC GATGCCGACA GCCGCGCGCT GTTCCTCACC
GTCTATGCCG TGCGCATGTC GGCGCTCGCG ATCGGGGAGC TGCTTGCCCA GCTGTTCGCC
GACCTGCCGG GCCGGGTCGA ATGCGGCGAG CTGGCGGTGC GCGAGGAAGC GCGCGGGCTG
CTGCTGCCGA CCGCGATCTT CGCGCGCTGG AGCCGCTGA
|
|---|
| Protein sequence | MWAPALPESE WAAADGEFVP ASDEDGGGRW YFHKPVPAEG WPLAWREARF TASCTPFRHL
GFFPDMAPVW DWLRERIADR PDPAFLNLFG YTGVGSQALA AAGASVTHVD ASKKSVAQAR
DNAALAGMAD KPVRWLVDDA GKFTAREVRR GRRYDAILLD PPKFGRGPNN ERWQIEEGLA
PLLADCRQLL DADSRALFLT VYAVRMSALA IGELLAQLFA DLPGRVECGE LAVREEARGL
LLPTAIFARW SR
|
|---|
| |