| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1365 |
|---|
| Symbol | |
|---|
| ID | 4081930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1421417 |
|---|
| End bp | 1422304 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638009731 |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_616412 |
|---|
| Protein GI | 103486851 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACAA GGAGAAACCC CATGTGCACC GAAAAGATGG AAGCCGATCG AGACCGTGCG
GGAATGCCCG TCGCACGCCG CAGCTTTGCG GCACTTGCGG GCGCGGGTGC ATTGATGGCG
GCGCTGCCCG CGCGCGCCAT CGCGGGCAAG CCGGTGAAGG GCCGCGATGT CTCGATCACG
ACGGCCGACG GTATCTGCGA CGCTTATTTT GTGGCGCCCA CCGAGGACAA GCATCCCGGC
GTGATTGTGT GGCCCGACAT CCGCGGCCTG CGCCCGGCCT TTCGCCAGAT GGCCGAGCGG
CTGGCGGGCG ACGGCTATGC AGTGCTGTGC GTCAATCCCT TTTATCGCTG GCAGAAGGCG
CCCGTGGTGG ACGCCGAAAA TCATTGGGGT GTCGCCGCGG TGCGGGAAAA ATTGTTCGGC
TATCTGAAGC AATTGTCGCG GCCGCTGGTC GAAACCGACG CCGCGGCACA TCTTGCCTTC
CTCGACGCGC AAGGCGAGGT CGATACGGCG CGCGGGATCG GGACCAGCGG CTATTGCATG
GGCGGGCCGA TGACGATCTA TACCGCGGCG CTGAAGCCCG GTCGCGTGCG CGCGGCGGCG
AGCTTTCACG GCGCCAGCGT CGCCACCGAC AAGCCCGACA GCCCGCATCT GCTGATCCCT
GCAAGCAAGG CCGGCTATCT GTTCGCGATC GCCGAGGATG ACGACAAGGA AAGCCCGAAC
GAGAAGGTCT TGCTGAAATC GGTGCTTGAA CCGCGGCCAG AGTGGCACGA GGTCGAGGTC
TATCCGGCGC AGCACGGCTG GTGCCCGCCC GACGGGCGCG TCTATGACGA AGCGGCGGCG
GAGAAGGCGT GGAGCCGCCA ACTCGCGCTG TTCAAGGCGA GTTTGTAA
|
|---|
| Protein sequence | MPTRRNPMCT EKMEADRDRA GMPVARRSFA ALAGAGALMA ALPARAIAGK PVKGRDVSIT
TADGICDAYF VAPTEDKHPG VIVWPDIRGL RPAFRQMAER LAGDGYAVLC VNPFYRWQKA
PVVDAENHWG VAAVREKLFG YLKQLSRPLV ETDAAAHLAF LDAQGEVDTA RGIGTSGYCM
GGPMTIYTAA LKPGRVRAAA SFHGASVATD KPDSPHLLIP ASKAGYLFAI AEDDDKESPN
EKVLLKSVLE PRPEWHEVEV YPAQHGWCPP DGRVYDEAAA EKAWSRQLAL FKASL
|
|---|
| |