| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1357 |
|---|
| Symbol | |
|---|
| ID | 4081922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1414316 |
|---|
| End bp | 1415161 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638009723 |
|---|
| Product | Hsp33 protein |
|---|
| Protein accession | YP_616404 |
|---|
| Protein GI | 103486843 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1281] Disulfide bond chaperones of the HSP33 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.266567 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCTGG GGCCGGTGCT CAACAGGATC ATTGCGGCGC ACAGCTATCC GCCGGTTGCC
GAAAAGCTGC TGGCCGAGGC GCTGGTGCTG ACGGTTCTGC TCGGTTCGAC GCTTAAGACC
GAGGGCAGCC AGCTCACCTT GCAAGCGCAG ACCGGTGGTG GGCCGGTCGA ATTGCTCGTC
TGCGACTACA AGGCGGGCGA ACTGCGCGGC TATCTGAAGT TCGATGCCGA ACGGCTCGCC
GAAGCCGGTT CGGATCCGAC CCTGTTCGCG CTGTTCGGCG AAGGCTTCCT CGCGATCACC
TTTGACCAGG CGGCGACGGG CGAGCGTTAT CAGGGCATCG TTCCGCTCGA AGGATCGTCG
ATCGGCCACG CCGCCGAACA TTATTTCGAA CAGTCCGAAC AAATCCCCAG CCTGATCAGT
CTCGCCGCGC GTCACGATGC CGGGGCGGAC TGTGTCGCGG GCGGACTGCT GCTCCAGCAT
CTGCCCGAAG GCGAGGTGGG ACGCGACCGG CTGCACGTAA GGCACGACCA TCCCGAGTGG
GATCATGCCA AAACGATCGC GGCGACGCTC AAGGACGAGG AACTCACCGA TCCCGCCACG
TCGCTCGAAA CGCTGGCGTG GCGGCTGTTT CACGAAGACG AGGTGCGCGT CGAACCCGGC
ACCGCCGTGT CGCGCGGCTG CCGGTGCAGC ACCGACTATT TTGCGGGGGT GCTGGCGCAG
TTCCCGCTGG CCGAGCGCGC GGCGATGGCC GACGACAAAG GCGAGATTGT CGTCGATTGC
GCCTTCTGCT CGCGCTTTTT CCCCATTTCG CTCACCGACA TCGCCGGCCA CGATCACGCC
GAATAG
|
|---|
| Protein sequence | MRLGPVLNRI IAAHSYPPVA EKLLAEALVL TVLLGSTLKT EGSQLTLQAQ TGGGPVELLV
CDYKAGELRG YLKFDAERLA EAGSDPTLFA LFGEGFLAIT FDQAATGERY QGIVPLEGSS
IGHAAEHYFE QSEQIPSLIS LAARHDAGAD CVAGGLLLQH LPEGEVGRDR LHVRHDHPEW
DHAKTIAATL KDEELTDPAT SLETLAWRLF HEDEVRVEPG TAVSRGCRCS TDYFAGVLAQ
FPLAERAAMA DDKGEIVVDC AFCSRFFPIS LTDIAGHDHA E
|
|---|
| |