| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1320 |
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| Symbol | |
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| ID | 4082244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1377996 |
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| End bp | 1379978 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009682 |
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| Product | transketolase |
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| Protein accession | YP_616367 |
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| Protein GI | 103486806 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.29997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATATC CCGAAGGCCA TTCGGCCGAA CGCCAGCTCG CCAACGCGAT CCGTGCGCTT
GCGATGGACG CCGTGCAGGC CGCGAACAGC GGCCATCCGG GGATGCCGAT GGGCATGGCC
GACGTCGCCA CGGTGCTGTA TTCGGACTAT CTGAAGTTCG ACCCGACCGA TCCCAAATGG
GCCGATCGCG ACCGATTCGT GCTGTCGGCG GGCCATGGGT CGATGCTCGC CTATGCAACG
CTGCACCTCG CGGGCTATGC GCGCCCGACG ATCGAGGACA TCCGTAATTT CCGCCAGCTG
CACAGCCCGT GCGCGGGACA TCCCGAAAAT TTCGAGCTTG AAGGCGTCGA AACCACCACT
GGTCCGCTGG GGCAGGGGCT CGCGACCGCG GTGGGCATGG CGATCGCCGA GCGGCACCTG
AATGCGCTCT ACGGCGATGG ACTGGTCGAT CACCGCACCT GGGTGATCGC AGGCGACGGC
TGTTTGATGG AGGGCATCAA CCACGAGGCG ATCGGGCTGG CTGGGCATCT TGGGCTCGGG
CGTCTGACCG TGCTGTGGGA CGATAACAAG ATCACCATCG ACGGATCGAC CGACCTGTCG
ACGAGCGAGG ATGTCGCCGC GCGCTATGCC GCGACCGGCT GGCACGTCGA AAGCTGCGAC
GGGCATGACC CGGCCGACAT CCGCCGTGCG ATCGACGCCG CGCTCGCCGA TCCGCGCCCT
TCGCTGATCG CGTGCCGGAC GATCATCGGT TTCGGCGCGC CGAACAAGCA GGGGACCTCT
GCAACGCACG GGGCGCCGCT CGGCGCCGAC GAGATCGCGG CGGCGCGCCG GGAACTGGGC
TGGACCGCCG AGCCTTTCGT CATCCCGGCC GACATTGCCG CAGCGTGGGC GTCCTTTGGC
GAGAAAGGCA AGAAACTTCA CAACGAGTGG AATAGTCGCC TCGCAACTAG CGAAAAGAAA
AACGATTTTG AAGCACGGCT GAATGGCAAA GTCGCCCCGG GCGCTGCCTT CAAAGCCTAT
CTCGACGGCC TTGCTGCCGA ACCGCCGAAG GTCGCAACGC GCAAGGCTTC GGAGAACACG
CTGAGCGCGC TCACCGTCGA TATTGCGGCG CTCGTCGGGG GCAGCGCCGA CCTGACCGGT
TCGAACAACA CCAAAACATC ATCGACCAAG CCACTGACCA GAAATGATTA TTCGGGACGC
TATATTTATT ATGGCATCCG CGAATTCGGC ATGGCCGCGG CGATGAACGG CATGGCGCTG
CACGGCGGCG TCGTCCCCTA TGGCGGCACC TTCCTGGTGT TCGCCGATTA TTGCCGCGCC
GCGATCCGCC TGTCGGCGCT CCAGAAACAG CGCGTCGTCT ATGTGATGAC CCACGACAGT
ATCGGCCTGG GCGAGGATGG TCCCACGCAC CAGCCGATCG AACATCTCCA GTCGCTGCGT
GCGATGCCCA ACCTGCTTGT GATGCGCCCC GCCGACGCGG TCGAAACCGC CGAATGCTGG
GCGCTCGCGC TCGCGCAGGA GGGGCGCCCG TCGCTGCTCG CGCTGACGCG CCAGAACTTG
CCGCCGCTGC GCCATGACGT CACGGAAAAT CGTTGTGCTA AAGGCGGTTA TCGCCTGCGT
GGGGCTTCGG CGGCACGCAA GGTCGTGCTG GTTGCGACGG GTTCCGAAGT GTCGCTGGCG
ATGGACGTCG CCGACAAGCT GGAAGCCGCC GGTCATGGCG CCGATGTCGT TTCGATGGTG
TCGACTGAAT TGTTCGACGA ACAGGACGCC GCTTATCAAG CCGACGTCCT GCCCGATGAT
GCGCTGATCG TGTCGATCGA GGCGGGCACG ACCTTTGGCT GGGAACGCTA CACCGGCCGC
GACGGCCTGC GTTTCGGCAT CGACAGTTTT GGCGCCTCGG CACCCATCGA AGACCTATTC
AGGCATTTCG GCCTTACCGC CGATGCCATC ACCCCCCAGA TCCTGGCCCG GCTGAGCCAT
TAA
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| Protein sequence | MTYPEGHSAE RQLANAIRAL AMDAVQAANS GHPGMPMGMA DVATVLYSDY LKFDPTDPKW
ADRDRFVLSA GHGSMLAYAT LHLAGYARPT IEDIRNFRQL HSPCAGHPEN FELEGVETTT
GPLGQGLATA VGMAIAERHL NALYGDGLVD HRTWVIAGDG CLMEGINHEA IGLAGHLGLG
RLTVLWDDNK ITIDGSTDLS TSEDVAARYA ATGWHVESCD GHDPADIRRA IDAALADPRP
SLIACRTIIG FGAPNKQGTS ATHGAPLGAD EIAAARRELG WTAEPFVIPA DIAAAWASFG
EKGKKLHNEW NSRLATSEKK NDFEARLNGK VAPGAAFKAY LDGLAAEPPK VATRKASENT
LSALTVDIAA LVGGSADLTG SNNTKTSSTK PLTRNDYSGR YIYYGIREFG MAAAMNGMAL
HGGVVPYGGT FLVFADYCRA AIRLSALQKQ RVVYVMTHDS IGLGEDGPTH QPIEHLQSLR
AMPNLLVMRP ADAVETAECW ALALAQEGRP SLLALTRQNL PPLRHDVTEN RCAKGGYRLR
GASAARKVVL VATGSEVSLA MDVADKLEAA GHGADVVSMV STELFDEQDA AYQADVLPDD
ALIVSIEAGT TFGWERYTGR DGLRFGIDSF GASAPIEDLF RHFGLTADAI TPQILARLSH
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