| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1266 |
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| Symbol | |
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| ID | 4080281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1319457 |
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| End bp | 1321934 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009626 |
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| Product | nitrite reductase (NAD(P)H) large subunit, NirB |
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| Protein accession | YP_616313 |
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| Protein GI | 103486752 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0963412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATC GCCCCCTCTC CCCCGACGCC GACACGCGCG CGCATCTCGT CGTCATCGGC
AACGGCATGG CCGGATGCCG CGCGGTCGAG GAGCTGCTCG CGCGCGACCC GGCGCGCTAT
CGCGTGACGA TCTTCGGCGC AGAGCCGCGC GTCAATTACA ATCGCATCAT GCTTTCGCCC
GTGCTGGCAG GCGAGAAAAG CTTCGAGGAT ATCGTCATCA ACGATGCCGA CTGGTATGCG
GACAATGGCA TCGCGCTGGT CGCGGGCGAC CCGGTGGTTG CACTCGATCG CGCGGCCAGG
ACCGTGACGA CGCGCGGCGG CATCGTCGAA ACCTATGACA AGCTGGTGAT TGCGACGGGG
TCCGATCCTT TCATCATTCC CGTTCCCGGC AAGGATTTGC CCGGCGTCAT TGCCTTCCGC
GACATGGACG ATGTCGGCAC GATGCTTAGC GCCGCGGAAC AGGGCGGCAG CGCCGTCGTC
ATCGGCGGCG GGCTGCTCGG GCTCGAGGCA GCGCATGGCC TGTCCTTGCG CGGCATGAAG
GTCACCGTGC TCCACCTCAT GCCGACCCTG ATGGAACGCC AGCTCGACGA AGCGGCGGGC
TGGCTCCTGA AACAGGCGCT GGAAGCGCGC GGCCAGACGA TCCTGACCGG CGCCGACACC
GCCGAGATCG TCGGCGAGGT CAAGGTCGAG GGCGTAAAGC TCAAGGATGG CACGCTGATC
CCCGCCGATC TGGTGGTCAT GGCGGTCGGC ATCCGCCCCT CGATCGCGCT CGCACGCGAT
GCCGGGCTTG CCGTCGGGCG GGGCATCTTG GTCGATGACC ATATGGTGAC CAGCGATCCC
GACATTCTCG CGGTCGGCGA ATGCGTAGAG CATGACGGAC AGGTTTACGG CCTCGTCGCG
CCGCTCTGGG ACATGTGCCG CAGCCTCGCC GACGGTCTGG TCGAACGACC GTCGGGCTAT
CGGGGTTCGG TGACCTCGAC CAAGCTGAAG GTGTCGGGGA TCGACGTCTT TTCGGCGGGC
GATTTTTCAG GCGGCGACGG TTGCGAGGAC ATCGTGCTGC GCGATGCAAG CCGCGGCGTC
TACAAGCGCG TGATCGTCAA GGACGACCGC ATCGTTGGCG CGGTGCTCTA TGGCGATACG
GCCGACGGCA GCTGGTACTT CGACCTGCTC AAACGCCAGG AGGATGTCTC CGGCCTCCGC
GATCTGTTGA TCTTCGGCCA GGCCTTCGCC GCTGGAGGAG GCGCGGCGGA CCCTAAGGCG
GCCGTTGCGG CGCTCTCGGA CGATGCCGAG ATTTGCGGCT GCAACGGCGT CACCAAGGGC
CAGGTCGTGT CGTGCATCAC CAAGGGAGCG CACAGCCTCG ACGCGGTGCG CAGCACCTGC
AAGGCGTCGG CGAGCTGTGG CAGCTGCACC GGCCTCGTCG AGACCCTGCT CGCGCTGACG
CTCGGCGACG AGGTGCAGGC CGGGCCCAAG ACGATGTGCA AATGCACCAG CTTCGGTCAC
GACGACGTCC GCCGCGAGAT CGTCGCGCAG AATATGCGCT CGATCCCCGA AGTGATGCAA
AAGCTGCACT GGACGACCCC CGACGGCTGC TCCTCCTGTC GTCCGGCGCT CAACTATTAT
CTGCTCTGCG CGCTGCCCGG CGACTATGTC GACGACCAGC AGAGCCGCTT CGTCAACGAG
CGCCTCCACG CCAATATCCA GAAGGACGGG ACCTACTCGG TCGTGCCGCG CATGTGGGGC
GGGCTGACTA ACCCGACCGA ACTGCGCGCG ATCGCCGATG TCGTCGAGAA GTACAATGCG
CCGATGGTCA AGGTGACCGG CGGCCAGCGG CTCGACATCT TCGGCATCAA GAAGGAGGAT
CTGCCCGCGG TCTGGGCCGA CCTCAATGCC GCCGGGATGG TCTCGGGCCA CGCCTATGGC
AAGGCGCTGC GCACGGTAAA AACCTGCGTC GGGTCCGAAT GGTGCCGCTT CGGCACGCAG
GATTCGACCG GCCTCGGCGT CAAGATCGAG CGGATGAGCT GGGGCAGCTG GATGCCGCAC
AAGTTCAAGA TCGCCGTGTC GGGCTGCCCG CGCAACTGCG CCGAGGCGAC GATCAAGGAT
TTCGGCGTCG TGTGCGTCGA CAGCGGCTAT GAGCTGCACA TCGGCGGCAA TGGCGGCATC
CATGTCCGCG CGACCGACCT GCTCTGCAAG GTCGCGACCG AACAGGAGGC GATGGACTAT
TGCGCTGCCT TCATCCAGCT CTACCGCGAG GAAGCGCGCT ATCTTGAGCG CACCGCGCCG
TGGATTGAGC GCGTCGGGCT CGACTATGTG AAGGGGCGGT TGCTCGACGA TCCGGCGGGC
CGCGAGGCGC TGCGCGCTCG CTTTCTCCAT TCGCAAAGCT TCAGTCAGGA CGATCCCTGG
GCACAGCGCG CCGAGGGCGC CGAGGCCGAA CATCATGCGC CGATGGCGCG CTTCATCCCG
CAGGAGGAAC TGGCATGA
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| Protein sequence | MEHRPLSPDA DTRAHLVVIG NGMAGCRAVE ELLARDPARY RVTIFGAEPR VNYNRIMLSP
VLAGEKSFED IVINDADWYA DNGIALVAGD PVVALDRAAR TVTTRGGIVE TYDKLVIATG
SDPFIIPVPG KDLPGVIAFR DMDDVGTMLS AAEQGGSAVV IGGGLLGLEA AHGLSLRGMK
VTVLHLMPTL MERQLDEAAG WLLKQALEAR GQTILTGADT AEIVGEVKVE GVKLKDGTLI
PADLVVMAVG IRPSIALARD AGLAVGRGIL VDDHMVTSDP DILAVGECVE HDGQVYGLVA
PLWDMCRSLA DGLVERPSGY RGSVTSTKLK VSGIDVFSAG DFSGGDGCED IVLRDASRGV
YKRVIVKDDR IVGAVLYGDT ADGSWYFDLL KRQEDVSGLR DLLIFGQAFA AGGGAADPKA
AVAALSDDAE ICGCNGVTKG QVVSCITKGA HSLDAVRSTC KASASCGSCT GLVETLLALT
LGDEVQAGPK TMCKCTSFGH DDVRREIVAQ NMRSIPEVMQ KLHWTTPDGC SSCRPALNYY
LLCALPGDYV DDQQSRFVNE RLHANIQKDG TYSVVPRMWG GLTNPTELRA IADVVEKYNA
PMVKVTGGQR LDIFGIKKED LPAVWADLNA AGMVSGHAYG KALRTVKTCV GSEWCRFGTQ
DSTGLGVKIE RMSWGSWMPH KFKIAVSGCP RNCAEATIKD FGVVCVDSGY ELHIGGNGGI
HVRATDLLCK VATEQEAMDY CAAFIQLYRE EARYLERTAP WIERVGLDYV KGRLLDDPAG
REALRARFLH SQSFSQDDPW AQRAEGAEAE HHAPMARFIP QEELA
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