Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1243 |
Symbol | |
ID | 4080314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1293266 |
End bp | 1294603 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638009603 |
Product | hypothetical protein |
Protein accession | YP_616291 |
Protein GI | 103486730 |
COG category | [R] General function prediction only |
COG ID | [COG3211] Predicted phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0271977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACC GCCGCAACTT CGCTCTCGCC GCCCTCGCTT TCGGTGGACT GGCGATCCAG TCGCGCGCAA CCGAAAAGGG ACTGATGCCG ACGGCGCCGG GTTACGGCCC GTTGCAGCCC GACCCAGCCG GGCTCATCGA TCTGCCGCCG GGCTTTTCCT ATCGCATCGT CTCCGCGCTG GGCGAGGCGA TGAGCGACGG ACACCGCGTG CCCGACCGCG CCGACGGCAT GGGCTGTTTC CAGCTGGACG GCGGCAAGAT CGCGCTGGTG CGCAACCACG AGCTTCAGCC GCGGCACGGC AGGGACGGGC CGTTTGGCAA GGCAGTGACG CTGCCCGCCG AGGCTTTCGA CAGCCGCGCG GGCGCGGCGC TGCCCGGCGG GACGACGACG CTGGTGCTCG ATCCGGACAG CCTGGCGGTG GAGACGCAGT ATCTGAGCCT CGTCGGCACG ATCCGCAATT GCGCGGGTGG CATCACCCCG TGGAACAGCT GGCTGACGTG CGAGGAAAGC GTCGACGGCC CCGATCAGGG CGTCGGACGA CCGCACGGCT GGATCTTCGA CGTCCCCGCC GCTGCGGGAA AGCTGGTGAA GGCCGAACCG CTCAAAGCCA TGGGGCGCTT CGTGCGCGAG GCGGCGGCGG TCGATCCGCG CACGGGCATC GTCTATATGA CCGAAGACCG CGACGACAGC CTCTTCTACC GCTTCATCCC CGACGTGCCG GGGTCGCTGG GCCGCGGCGG GCGGTTGCAG GCGCTTGCCT TTCACGACGA GTCCATCCGC GACAGTCGCA ACTGGGGCGA GCGCCGTATC GCGCCGGGAA GCTGGCTTTT CGTGCGGTGG ATCGACCTCG ACGACCCCGA AAGCCCCGCC GACGACCTTC GGCATCGCGG CGCCAAACAG GGCGCGGCGG TTTTTGCGCG CGGCGAGGGC ATCCATTGGG GCGCCGACGA GCTTTATTTC ACCTGCACAT CGGGCGGCGC CGCGAAAGAG GGGCAGATCA TGCGCTACCG CCCCTCGCGT CACGAAGGGA CCGATCGCGA ACGCACGGTT CCCGGCCGGA TTCAGCTCTT CCTCGAATCG ACCGACCCGG CCCATTACAG CTTCGGCGAC AATCTGACCG TCGCCCCCAA CGGGCATCTG ATCGTGTGCG AGGACCAGTA TCTCGATACG GTCGACAATC ATCTGCGCGG CGTCACTCCC TTTGGCGAAG TCTATCCCTT TGCCCGGATC CGGGTGCAGA CCGAACCGGC GGGCGTGTGT TTTTCGCCCG ACGGCAAGAC CATGTTCGTC AACCTCTATA GTCCGACCAA AACGCTCGCG ATCCGGGGGC CCTTTTGA
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Protein sequence | MLDRRNFALA ALAFGGLAIQ SRATEKGLMP TAPGYGPLQP DPAGLIDLPP GFSYRIVSAL GEAMSDGHRV PDRADGMGCF QLDGGKIALV RNHELQPRHG RDGPFGKAVT LPAEAFDSRA GAALPGGTTT LVLDPDSLAV ETQYLSLVGT IRNCAGGITP WNSWLTCEES VDGPDQGVGR PHGWIFDVPA AAGKLVKAEP LKAMGRFVRE AAAVDPRTGI VYMTEDRDDS LFYRFIPDVP GSLGRGGRLQ ALAFHDESIR DSRNWGERRI APGSWLFVRW IDLDDPESPA DDLRHRGAKQ GAAVFARGEG IHWGADELYF TCTSGGAAKE GQIMRYRPSR HEGTDRERTV PGRIQLFLES TDPAHYSFGD NLTVAPNGHL IVCEDQYLDT VDNHLRGVTP FGEVYPFARI RVQTEPAGVC FSPDGKTMFV NLYSPTKTLA IRGPF
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