Gene Sala_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1243 
Symbol 
ID4080314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1293266 
End bp1294603 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content67% 
IMG OID638009603 
Producthypothetical protein 
Protein accessionYP_616291 
Protein GI103486730 
COG category[R] General function prediction only 
COG ID[COG3211] Predicted phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0271977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC GCCGCAACTT CGCTCTCGCC GCCCTCGCTT TCGGTGGACT GGCGATCCAG 
TCGCGCGCAA CCGAAAAGGG ACTGATGCCG ACGGCGCCGG GTTACGGCCC GTTGCAGCCC
GACCCAGCCG GGCTCATCGA TCTGCCGCCG GGCTTTTCCT ATCGCATCGT CTCCGCGCTG
GGCGAGGCGA TGAGCGACGG ACACCGCGTG CCCGACCGCG CCGACGGCAT GGGCTGTTTC
CAGCTGGACG GCGGCAAGAT CGCGCTGGTG CGCAACCACG AGCTTCAGCC GCGGCACGGC
AGGGACGGGC CGTTTGGCAA GGCAGTGACG CTGCCCGCCG AGGCTTTCGA CAGCCGCGCG
GGCGCGGCGC TGCCCGGCGG GACGACGACG CTGGTGCTCG ATCCGGACAG CCTGGCGGTG
GAGACGCAGT ATCTGAGCCT CGTCGGCACG ATCCGCAATT GCGCGGGTGG CATCACCCCG
TGGAACAGCT GGCTGACGTG CGAGGAAAGC GTCGACGGCC CCGATCAGGG CGTCGGACGA
CCGCACGGCT GGATCTTCGA CGTCCCCGCC GCTGCGGGAA AGCTGGTGAA GGCCGAACCG
CTCAAAGCCA TGGGGCGCTT CGTGCGCGAG GCGGCGGCGG TCGATCCGCG CACGGGCATC
GTCTATATGA CCGAAGACCG CGACGACAGC CTCTTCTACC GCTTCATCCC CGACGTGCCG
GGGTCGCTGG GCCGCGGCGG GCGGTTGCAG GCGCTTGCCT TTCACGACGA GTCCATCCGC
GACAGTCGCA ACTGGGGCGA GCGCCGTATC GCGCCGGGAA GCTGGCTTTT CGTGCGGTGG
ATCGACCTCG ACGACCCCGA AAGCCCCGCC GACGACCTTC GGCATCGCGG CGCCAAACAG
GGCGCGGCGG TTTTTGCGCG CGGCGAGGGC ATCCATTGGG GCGCCGACGA GCTTTATTTC
ACCTGCACAT CGGGCGGCGC CGCGAAAGAG GGGCAGATCA TGCGCTACCG CCCCTCGCGT
CACGAAGGGA CCGATCGCGA ACGCACGGTT CCCGGCCGGA TTCAGCTCTT CCTCGAATCG
ACCGACCCGG CCCATTACAG CTTCGGCGAC AATCTGACCG TCGCCCCCAA CGGGCATCTG
ATCGTGTGCG AGGACCAGTA TCTCGATACG GTCGACAATC ATCTGCGCGG CGTCACTCCC
TTTGGCGAAG TCTATCCCTT TGCCCGGATC CGGGTGCAGA CCGAACCGGC GGGCGTGTGT
TTTTCGCCCG ACGGCAAGAC CATGTTCGTC AACCTCTATA GTCCGACCAA AACGCTCGCG
ATCCGGGGGC CCTTTTGA
 
Protein sequence
MLDRRNFALA ALAFGGLAIQ SRATEKGLMP TAPGYGPLQP DPAGLIDLPP GFSYRIVSAL 
GEAMSDGHRV PDRADGMGCF QLDGGKIALV RNHELQPRHG RDGPFGKAVT LPAEAFDSRA
GAALPGGTTT LVLDPDSLAV ETQYLSLVGT IRNCAGGITP WNSWLTCEES VDGPDQGVGR
PHGWIFDVPA AAGKLVKAEP LKAMGRFVRE AAAVDPRTGI VYMTEDRDDS LFYRFIPDVP
GSLGRGGRLQ ALAFHDESIR DSRNWGERRI APGSWLFVRW IDLDDPESPA DDLRHRGAKQ
GAAVFARGEG IHWGADELYF TCTSGGAAKE GQIMRYRPSR HEGTDRERTV PGRIQLFLES
TDPAHYSFGD NLTVAPNGHL IVCEDQYLDT VDNHLRGVTP FGEVYPFARI RVQTEPAGVC
FSPDGKTMFV NLYSPTKTLA IRGPF