Gene Sala_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1204 
Symbol 
ID4080699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1244700 
End bp1245965 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content68% 
IMG OID638009565 
ProductYceI 
Protein accessionYP_616253 
Protein GI103486692 
COG category[C] Energy production and conversion
[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein
[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTC AACGCTATAG CTATACCGCG ATCGCGCTCC ACTGGCTGAT CGCGCTGCTC 
CTCGCCTTTC AGGTCGCGCT CGGCTGGGCG CTCGAAGGCG ATAACAGTCC CGAGCTGTTT
CAGCGGTTCC AGCTTCACAA ATCGGTCGGC ATCGCGATCC TGCTGCTCAG CCTCCTCCGC
CTTGCGACCC GTTTCGTCAT GCCGCGCCCG CCGGCGTCCG ACGGGCCGAC ATGGACGCGC
GCGCTGGCAG GCATCGTCCA CAGCCTTTTC TATGTCGTGA TGATCGTCGG CCCGCTCACC
GGCTGGCTGC TCGTATCGAC GGCGAAGATT CAGGTGCCGA CCTTGCTGTT CGGTATGGTG
CCCTGGCCGC ACCTTCCCGT CGGTCGCGGC TGGCATGAGC CTGCCGAGGT GATCCACGAG
ACAATGGCGT GGCTGGCGAT CGGGCTGTTC CTGCTGCATG TCGCGGGCGC GCTCCGTCAC
CAGTGGTTGC TCGGCAAGCC CGAGCTTCAG CGGATGATCC CGTCGGCGCG CGGCAAAGCC
GTGGGGGCCG TCTTGATCGC ACTGGCGTTC GTCGGCGGCG CCTTCGCCGT GGGTTCAAGC
GTCTATCCCG ACCGCGACCG GGCCGCGCCC GCCGAACCGG CCATGTCCAA TACAGCACAG
ACCGCGCCCG TCGCGCCTCC CGCGCCGATC GAGGCCGAAA AGACGGAAGC GGACGAAGCC
CCTGACAGCG ATCCCGCTGC CGAGCCCGAA GACACGGCAG AGCCCCTCGC CGACTGGTCG
GTGGCGCCGG GCGGGCGCCT TGGCTTCACC GCGCGCTGGA ATGGCGAGGC GGTCGAGGGG
CGCTTCGATC GCTGGCGCGC CGACATCCGG TTCAGTCCCG ACCATCTCAC GGGGTCGCGC
ATCAAGGTGA CGGTCGACCT CGCCTCGGCC GACACCGGCG ACGGCCAGCG CGACGATTCG
CTGAAGGGCA GCGATTTCTT CGATACCGCC GCACATCCCA GCGCAATCTT CACCGCGCGC
GACGTTCGTA AGCTTGGTGG TGACCGCTAT GCGGCGCGCG GCACGCTCGA GCTGCGCGGC
GCCGCCAGGC CGGTGACGCT GCGCTTCACG CTGGGGATCG AGGGCGACCG CGCGCGCGTC
AACGGCACGG CGCGGATCGA CCGCACGGCG TTCGGGGTCG GTCAGGGCGA ATGGGCAGCG
ACCGATGCGA TTCCGGCGGA AGTCGATATC GCCTTTGCCT TCACTGCGAC GCGGCAGTCA
GGCTGA
 
Protein sequence
MAVQRYSYTA IALHWLIALL LAFQVALGWA LEGDNSPELF QRFQLHKSVG IAILLLSLLR 
LATRFVMPRP PASDGPTWTR ALAGIVHSLF YVVMIVGPLT GWLLVSTAKI QVPTLLFGMV
PWPHLPVGRG WHEPAEVIHE TMAWLAIGLF LLHVAGALRH QWLLGKPELQ RMIPSARGKA
VGAVLIALAF VGGAFAVGSS VYPDRDRAAP AEPAMSNTAQ TAPVAPPAPI EAEKTEADEA
PDSDPAAEPE DTAEPLADWS VAPGGRLGFT ARWNGEAVEG RFDRWRADIR FSPDHLTGSR
IKVTVDLASA DTGDGQRDDS LKGSDFFDTA AHPSAIFTAR DVRKLGGDRY AARGTLELRG
AARPVTLRFT LGIEGDRARV NGTARIDRTA FGVGQGEWAA TDAIPAEVDI AFAFTATRQS
G