| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1198 |
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| Symbol | |
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| ID | 4080693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1239058 |
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| End bp | 1240230 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009559 |
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| Product | Orn/DAP/Arg decarboxylase 2 |
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| Protein accession | YP_616247 |
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| Protein GI | 103486686 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCC GTGCCGGCGA TCCCGGAGCC TTTACCCGCT TCGACCTGAC CCGCGTCCCC
TCGCCCGCCT TCGTCGTCGA TGCGGCCAAG ATACGCAGCA ATCTCGCGCT GCTGCGCCAT
ATCGGCGATG CCTCGGGCGC ACGCGTGCTC GCGGCGCTCA AGGCCTTTTC GATGTGGTCG
CTCGGCCCGA CGGTTGCCGA ATATCTGGAC GGCGTCTGCG CGTCGGGCCT TTACGAGGCC
AAACTGGGCC GCGCCGAATA TGGCGGAGAG GTCGCGACCT ATTGCGCGGG CTACAAGGAA
GCCGACCTGC CCGAAATCGC GGCGCTTTCC GACCATCTCA TCTTCAACTC CCCCGGCCAG
ATCGCGCGCT TCCGCCCGCT GCTGGACGAT TTGCGCGCCA AGGGCGAGCG CTTCGACGTC
GGCCTGCGCG TCAATCCCAT GCACAGCGAG GGCGAGGTCG CCAAATACGA CCCCGCGGCG
CCGTGCAGCC GCCTCGGCTT TCCGATCACG CAATTGCTCC CCGAACATAT GGATGGCGTC
GACGGCGTGC ATATGCACAG CCTGTGCGAA CAGGATTTCC CGCCGCTCGA ACGCACATGG
AGCGCGGTCC ACCCGATGCT GAGGCCTTTC TTTGGCCAGC TCAAATGGAT CAATTTCGGC
GGCGGCCACC ATGTGACGCG CGCCGATTAT CAGGTCGACG ACCTCATCGC CTTTCTGAAA
CAGGTCCGTG CCGCCACCGA TTGCGACGTG ATGATCGAGC CGGGCGAGGC CATCGCGCTC
GACGCCGGCA TCCTCGTCGG CGAGCTGCTC GATCTGTTCC ATAACGGCAT GAGCATCGGC
ATCACCGACA TTTCGGCGAC CTGCCACATG CCCGACGTGA TCGAGGCACC TTATCGCCCC
GCGATGCTGG GCGAAGGCAG CGAAGGCGCG GTGACGCGCC TCGGCGGCCC CTCGTGCCTC
GCGGGCGATG TCATCGGCGA CTATCGACTG CCCGGCGGCG CGCGTATCGG CCAGCGCTTC
GCCTTCCTCG ACCAGGCGCA TTATTCGATG GTCAAGACCA ACACATTCAA CGGCGTGCCG
CTTCCGTCGA TCTGGTTGTG GGACAGCGAG ACCGACGAAC TCGAATTGAT CCGCCAGTTC
GGTTTTGAGG ATTTCAAGAC GCGGCTGAGC TGA
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| Protein sequence | METRAGDPGA FTRFDLTRVP SPAFVVDAAK IRSNLALLRH IGDASGARVL AALKAFSMWS
LGPTVAEYLD GVCASGLYEA KLGRAEYGGE VATYCAGYKE ADLPEIAALS DHLIFNSPGQ
IARFRPLLDD LRAKGERFDV GLRVNPMHSE GEVAKYDPAA PCSRLGFPIT QLLPEHMDGV
DGVHMHSLCE QDFPPLERTW SAVHPMLRPF FGQLKWINFG GGHHVTRADY QVDDLIAFLK
QVRAATDCDV MIEPGEAIAL DAGILVGELL DLFHNGMSIG ITDISATCHM PDVIEAPYRP
AMLGEGSEGA VTRLGGPSCL AGDVIGDYRL PGGARIGQRF AFLDQAHYSM VKTNTFNGVP
LPSIWLWDSE TDELELIRQF GFEDFKTRLS
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