| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1195 |
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| Symbol | |
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| ID | 4080690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1234974 |
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| End bp | 1236143 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009556 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_616244 |
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| Protein GI | 103486683 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGC TGTCCGGCAT TCGCATCATC GACCTGACGA CGGTTATTTT CGGCCCCTAT
GCGACGCAGA TGCTCGCCGA CCTGGGGGCC GAGGTCATCA AGGTCGAGAC ACCGGGAGCG
GGTGACATCT CGCGTTACCT TGGCAGCGGC ATTCCTGACC CGACGATGGG GTCGATCCAC
CTCACGGTGA ACCGCGGCAA AAGGTCGATC GCGCTCGACC TGAAACAGGC AGAGGACGCG
GCGGTGCTGC GCGATCTCGT CGCCACCGCC GACGTGTTTT TCCACAATAT CCGCGGCAAG
GCGATCGCCA AGCTGGGGTT CGACTATGCC GCGTGCCGCG CGCTCAAGCC GGATATCATC
TATGTCCATG GCACGGGCTT CGGACAGGAC GGCCCCTATG CCGACCTTCA GGCCTATGAC
GATGTCATCC AGGCTGCGAG CGGCACCACC AGCCTGCTCC CGCGCGTCGA TGGCGACCCG
CGCCCGCGCT ATTTCCCGTC GCTGATCGCC GACAAGATCG CGGGCCAGTT CGGCGCGCAG
GCGATCCTGG CGGCGCTGGT TCACAAGCTG CGGACCGGCG AGGGGCAGGC GGTCGAGGTG
CCGATGTTCG AATGTTTCAC TGCCTTCATG CTCACCGAAC ATTTGCGCGA TGCGACGCTC
GACCCGCCGC TCGGCCCCGC GGGTTATCCG CGCCAGCTCG ATCCGACCCG CCAGCCCTTC
CCGACACGCG ATGGCTATGT CGCAATCGTC CCCTATACAC CCGAATCGAC CGTGCGCCTG
ATGACGCTGC TCGACAGCGA CGCCTTGCTC GAAACCCCCG AATATGCAGC GGCAAAGGCC
GAGGGTCGGC ATATGCCGCT CATCTATGCC GAAATCGCGC GCAAAACGCC GACAAAGACC
ACCGCCGAAT GGCTGGCGAT CTTTGCCGCC AACGATATTC CGGCGATGGC GGCGCGCGAT
CTGCAGCATG TCAGGGAAGA TCCCCATTTC GAAGCGACAG GCTTTTTCCG GCGCCGCACC
CATCCCGACG TCGGCGGCTT TCACGAGATG CAGCCACCCG TCCGCTATGG CGCGATGGGG
CCACGCGACC TGGGTTTTGC GCCACGGCTC GACGGTGATG GCGTGGCCAT CCGGGCCGAA
CTGTCGCAGG CGAAGGATTG CGTTGCATAA
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| Protein sequence | MSMLSGIRII DLTTVIFGPY ATQMLADLGA EVIKVETPGA GDISRYLGSG IPDPTMGSIH
LTVNRGKRSI ALDLKQAEDA AVLRDLVATA DVFFHNIRGK AIAKLGFDYA ACRALKPDII
YVHGTGFGQD GPYADLQAYD DVIQAASGTT SLLPRVDGDP RPRYFPSLIA DKIAGQFGAQ
AILAALVHKL RTGEGQAVEV PMFECFTAFM LTEHLRDATL DPPLGPAGYP RQLDPTRQPF
PTRDGYVAIV PYTPESTVRL MTLLDSDALL ETPEYAAAKA EGRHMPLIYA EIARKTPTKT
TAEWLAIFAA NDIPAMAARD LQHVREDPHF EATGFFRRRT HPDVGGFHEM QPPVRYGAMG
PRDLGFAPRL DGDGVAIRAE LSQAKDCVA
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