Gene Sala_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1194 
Symbol 
ID4080689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1234495 
End bp1234926 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID638009555 
Producthypothetical protein 
Protein accessionYP_616243 
Protein GI103486682 
COG category[S] Function unknown 
COG ID[COG5331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.66079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACA GTCTACTCGC ACCCGGCGCC GTCCTGGCGC TCTGGACGAT CATCATGCTT 
GGCTGGGTCG CCGTGACCCG TTTTTCGGCG ATGGCCAAGG TCGGCGTTGA CATCAAGGCC
GCACCGCCGG GCGGGCGCGG CGCCGATCTG GAAAATATGC TGCCGCCGGA AACCAACTGG
AAGTCGCATA ATTACACGCA TTTGTGCGAG CAGCCGACGA TCTTTTACGC GGTGCTCCTC
TTCCTGCACC TGTCGGGCGG CGACACCGAT CTGACGCGCG GTCTCGCCTG GGCCTATGTC
GTGCTGCGCA TCATCCACAG CCTGTGGCAA GCAACCGTGA ACCGTATTCC GGTGCGTTTC
ACCATCTTTG CGCTCGCGAC ACTCTGTCTG TTCGCGCTAT CGATTCTCGC CGTCATCGCC
ACTCTGGGTT GA
 
Protein sequence
MSDSLLAPGA VLALWTIIML GWVAVTRFSA MAKVGVDIKA APPGGRGADL ENMLPPETNW 
KSHNYTHLCE QPTIFYAVLL FLHLSGGDTD LTRGLAWAYV VLRIIHSLWQ ATVNRIPVRF
TIFALATLCL FALSILAVIA TLG