Gene Sala_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1193 
Symbol 
ID4080841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1234050 
End bp1234484 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content60% 
IMG OID638009554 
Producthypothetical protein 
Protein accessionYP_616242 
Protein GI103486681 
COG category[S] Function unknown 
COG ID[COG5331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0476503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGA ACGCAATTCT TGGACCGGTC GCGACGCTCG CGCTGTGGTC GATGGTCATG 
TGGGTATGGA TGTATGCGAC ACGCATCCCC GCGATGCAGC GCGCCAAGAT CGACGCCGCC
AAGATGGTCG GCGGCACCGG CAAGGGGCTC GACGATGTCC TGCCCGCCGA AGTGCAGTGG
AAGGCACATA ATTACAATCA TTTGATGGAA CAGCCGACCG TGTTCTATGC TGTCGCGATC
GCCCTGGCGA TCGGCGGCAT GGGCGGCGGG CTGAACGCGC AGATCGCCTG GGCCTATGTC
GCGCTGCGCA TCGTCCATAG CCTCATTCAA GTGACGGTAA ACCGCGTGAT GTGGCGCTTT
CTGGTGTTCG CGTTGGCCAG TCTTGCCTTA TTTGCGCTCA GTGTTCACGC CTTCATGGGG
TTTGTGCTGC ATTGA
 
Protein sequence
MNTNAILGPV ATLALWSMVM WVWMYATRIP AMQRAKIDAA KMVGGTGKGL DDVLPAEVQW 
KAHNYNHLME QPTVFYAVAI ALAIGGMGGG LNAQIAWAYV ALRIVHSLIQ VTVNRVMWRF
LVFALASLAL FALSVHAFMG FVLH