Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1188 |
Symbol | |
ID | 4080836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1228453 |
End bp | 1229184 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638009549 |
Product | N-formylglutamate amidohydrolase |
Protein accession | YP_616237 |
Protein GI | 103486676 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3931] Predicted N-formylglutamate amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.550725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGG CGTGGCACCA ACTGGGCGAG CCGCGCGCCG ACGGCATATT GTTGATCGGG GATCATGCGT CGGCGTATGT CCCGAACGAC ATCGACCTGG GCATCGCCCC CGCGCTGCTG ACCACCCATA TCGCGATCGA CATCGGCGTG GCCGAGGTCG CGGCGCTGCT GGTCGAAAGC GGCGTGGTCG ATGCCGCAAT TCTCGGCGGT GTGTCGCGGC TGGTCGTCGA TCTGAACCGC GAGGAAGAGG CGCCGGGCGT GCTGCCGATC GCAAGCGACG GCCATGCGGT GCCGGGCAAT GCGCTGGACG ATGCGGCGCG CGAGGCGCGG CTGGCGCGCT TTTACCGGCC CTATCACGAT CATATCGCGG CGACGATCGC GAAGCACCCG CCCGCAATGA TCCTGTCGCT GCACAGCTTC ACCCCGTCGC TGTCGGCGCA TCCCGGTCAG GCGCGGCCGT GGCACGTCGG GGTGCTCTAC AACGAGGACG ATCGCCTTGT TGCCACTGCG ATCGCCGCGC TGGAGGCCGA AGGGCTGCTC GTCGGCGACC AGCAACCCTA TTCGGGCAAG GCGCTCAACG CGACGATGAA TCGCCACGCC GAAGCGAACG GCATTCCCTA TATCGGCATC GAGATGCGAC AGGATCTGGT CGGCGACGCG GCGGGGCAGG CGCTGTTCGC CGAGCGGCTG GCGCGAATGT GCAGGAAAGT GACATTGAAC ATCGGGGAAT AG
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Protein sequence | MSEAWHQLGE PRADGILLIG DHASAYVPND IDLGIAPALL TTHIAIDIGV AEVAALLVES GVVDAAILGG VSRLVVDLNR EEEAPGVLPI ASDGHAVPGN ALDDAAREAR LARFYRPYHD HIAATIAKHP PAMILSLHSF TPSLSAHPGQ ARPWHVGVLY NEDDRLVATA IAALEAEGLL VGDQQPYSGK ALNATMNRHA EANGIPYIGI EMRQDLVGDA AGQALFAERL ARMCRKVTLN IGE
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