Gene Sala_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1188 
Symbol 
ID4080836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1228453 
End bp1229184 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID638009549 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_616237 
Protein GI103486676 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3931] Predicted N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.550725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG CGTGGCACCA ACTGGGCGAG CCGCGCGCCG ACGGCATATT GTTGATCGGG 
GATCATGCGT CGGCGTATGT CCCGAACGAC ATCGACCTGG GCATCGCCCC CGCGCTGCTG
ACCACCCATA TCGCGATCGA CATCGGCGTG GCCGAGGTCG CGGCGCTGCT GGTCGAAAGC
GGCGTGGTCG ATGCCGCAAT TCTCGGCGGT GTGTCGCGGC TGGTCGTCGA TCTGAACCGC
GAGGAAGAGG CGCCGGGCGT GCTGCCGATC GCAAGCGACG GCCATGCGGT GCCGGGCAAT
GCGCTGGACG ATGCGGCGCG CGAGGCGCGG CTGGCGCGCT TTTACCGGCC CTATCACGAT
CATATCGCGG CGACGATCGC GAAGCACCCG CCCGCAATGA TCCTGTCGCT GCACAGCTTC
ACCCCGTCGC TGTCGGCGCA TCCCGGTCAG GCGCGGCCGT GGCACGTCGG GGTGCTCTAC
AACGAGGACG ATCGCCTTGT TGCCACTGCG ATCGCCGCGC TGGAGGCCGA AGGGCTGCTC
GTCGGCGACC AGCAACCCTA TTCGGGCAAG GCGCTCAACG CGACGATGAA TCGCCACGCC
GAAGCGAACG GCATTCCCTA TATCGGCATC GAGATGCGAC AGGATCTGGT CGGCGACGCG
GCGGGGCAGG CGCTGTTCGC CGAGCGGCTG GCGCGAATGT GCAGGAAAGT GACATTGAAC
ATCGGGGAAT AG
 
Protein sequence
MSEAWHQLGE PRADGILLIG DHASAYVPND IDLGIAPALL TTHIAIDIGV AEVAALLVES 
GVVDAAILGG VSRLVVDLNR EEEAPGVLPI ASDGHAVPGN ALDDAAREAR LARFYRPYHD
HIAATIAKHP PAMILSLHSF TPSLSAHPGQ ARPWHVGVLY NEDDRLVATA IAALEAEGLL
VGDQQPYSGK ALNATMNRHA EANGIPYIGI EMRQDLVGDA AGQALFAERL ARMCRKVTLN
IGE