| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1172 |
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| Symbol | |
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| ID | 4080878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1206815 |
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| End bp | 1207561 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638009533 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_616221 |
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| Protein GI | 103486660 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.162207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.323144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGC GCAAATATGT GGTCGGCAAC TGGAAGATGA ACGGGCTGAA GGAGGCGCTC
GGCGAAGCCC GGGCGATTTT TGCCGCCGCC GATACGCACC CCGGCGTCGA CGTCGCGCTG
TGCCCGCCCT TCACATTGAT CGGCGCGATG GCCGCGGCAG CGCCGGGCAA GGCGATCGGC
GGACAGGATT GCCACAGCGC CGCGTCGGGC GCCTTCACCG GCTCGGTCGC GGCGCCCATG
CTTGCCGACG TCGGCGCGTC GCTTGTCATC GTCGGGCACA GCGAACGGCG CGAGGGTTGC
GGCGAAAGCG ACGCCGATGT GCGCGCGAAG GCCGAGGCGG CGCTCGCCGC GGGCTTGTCG
GTTATCCTCT GCGTCGGCGA ACCGCGCAGC GTACGCGAGT CGGGCGGCGC GATCGACCAT
GTGCTGGCGC AGGTCGCGGA ATCGGTGCCG GACGCCCTCG ATCCGCAGCG GTTTGCCATC
GCTTATGAGC CGATCTGGGC GATCGGCACG GGGCTGGTCC CGACCGTCGC CGACGTCGCG
GCGATGCACG GCGCGATCCG CAGCGCGCTG GCCGACCGTT TCGGCGACGC CGCACAGGCA
ATCCGCATCC TCTATGGCGG CTCGGTCAAT GGTGACAATG CCGCCGAACT GCTGGATACC
GGCGACGTCG ACGGTGCGCT CGTCGGCGGC GCCAGCCTGA CCGCCGCGAA GTTCGTGCCG
ATCATCGAGG CCGCGGCCGG ACTTTAA
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| Protein sequence | MTRRKYVVGN WKMNGLKEAL GEARAIFAAA DTHPGVDVAL CPPFTLIGAM AAAAPGKAIG
GQDCHSAASG AFTGSVAAPM LADVGASLVI VGHSERREGC GESDADVRAK AEAALAAGLS
VILCVGEPRS VRESGGAIDH VLAQVAESVP DALDPQRFAI AYEPIWAIGT GLVPTVADVA
AMHGAIRSAL ADRFGDAAQA IRILYGGSVN GDNAAELLDT GDVDGALVGG ASLTAAKFVP
IIEAAAGL
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