Gene Sala_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1163 
Symbol 
ID4080869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1196047 
End bp1196358 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content65% 
IMG OID638009524 
Producthypothetical protein 
Protein accessionYP_616212 
Protein GI103486651 
COG category[S] Function unknown 
COG ID[COG3502] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0556708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.177058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CGACGACTGC CTTCAAGGTG CTTACCGCGC AGCAGTGGAC CGATTTCGAG 
CGCGAGCGCG TCTTCCGCGG CGCGCCGGTC GACATCGAGG ATGGCTATAT CCACCTGTCG
ACCGCGGCGC AGCTCGACAC GACGATCGCA AAATATTTCG CCGACCAGTC GGACCTGATG
GTCGCCGAGG TGGATCTCGT CCAGTTGGGC GATGCCGTTC GCTGGGAACC CGCGCGCGGC
GGCGAGCTCT TCCCGCACAT CTACGCCGAA CTGCCGATCG AGGCGGTGGT GAGCCTGCAA
CAACGCGGCT GA
 
Protein sequence
MTTPTTAFKV LTAQQWTDFE RERVFRGAPV DIEDGYIHLS TAAQLDTTIA KYFADQSDLM 
VAEVDLVQLG DAVRWEPARG GELFPHIYAE LPIEAVVSLQ QRG