Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1139 |
Symbol | |
ID | 4080884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1177176 |
End bp | 1177904 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638009500 |
Product | sporulation related |
Protein accession | YP_616188 |
Protein GI | 103486627 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.797114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGGG GAAATATGAC GGGTCAGGAT GGCGAAGGGC TGGGGCTCGA AGGCGAGGAC CGGCTGCCCT GGCTCGAAGC CGCCGACGGC TTCGACGACG ATGGCGAAGT GTCGCCCGCC CGCCTGCTGA TCATGGTGCT CGGCGGCCTG TTGCTGATCG GCGCCGTGCT TGGCGGACTC TGGTGGATCC AGAATGGTGG CGCGCGCGGC AAGGGCGAAC TGATCGCCGC TGAAAAGGGC GACTACAAGG TCGCGCCCGC GAGCGACGGC GCCAAGACCT TCGAGGGTGA AGGCGACGCC AGCTTCTCGG CCAGCGAGGG TGCCGCACCG GCGGGCAAGG TCGATCCGTC GCGCATGCCC GAGGAACCGG CCGTGACAGC GGTGGAGCAC GAAGCCGCCG CGAAGCAGGC GAAGAAGGTG CCCGCTCCGG CGGCGAAGGC GGAACCCAGG GCGGCCGCAA AGGCCGCGGC AGCGTCTGAA GCGGCGGCAC CGGGCGATGC GATGATCCAG CTTGGCGCGT TCAGCAGCGA AGGCGCCGCA GCGAAGGCCT GGACGAATCT GTCCAAGCGT TTTGCCTATC TCGCCGATCT CAATCGGGTA ATTTCGCCGG CCACGGTCGG ATCGGGAACC GTTTATCGTT TGCGCGTTTC GGCAGGAACG GCCGCCAACG CCGCGAATTT GTGCGGAAAA CTGCGCGTAG CGGGTGAAAA TTGCGTCATC GTCCGCTGA
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Protein sequence | MAGGNMTGQD GEGLGLEGED RLPWLEAADG FDDDGEVSPA RLLIMVLGGL LLIGAVLGGL WWIQNGGARG KGELIAAEKG DYKVAPASDG AKTFEGEGDA SFSASEGAAP AGKVDPSRMP EEPAVTAVEH EAAAKQAKKV PAPAAKAEPR AAAKAAAASE AAAPGDAMIQ LGAFSSEGAA AKAWTNLSKR FAYLADLNRV ISPATVGSGT VYRLRVSAGT AANAANLCGK LRVAGENCVI VR
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