| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1131 |
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| Symbol | |
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| ID | 4081491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1170111 |
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| End bp | 1170599 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638009492 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_616180 |
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| Protein GI | 103486619 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.230695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.722441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATG GCACGATCGC GCTCGGCCTG ATGGCCGTTC TGGGGCTGAT GATGATCGCC
GCGGCGGTGA GTGACATCCG GTCGCGAACC ATTTCCAACG AGCTCAATGT CGCAATGGCG
ATCCTTGCGG TTCCCTTCTG GGTGGTGTCG GGGCTGACGC TCTGGCCCGA CGTGCCGATC
CAGTTCGGCG CGGCGTTGCT GGTCTTTCTG GTTTTCGCCC TGCTTTTCGC GATCGGTGCG
ATGGGCGGCG GCGATGTCAA AATGATCTGC GCCGTGATGC TGTGGATCCC GCTTCCGCTG
GTCCTGCCCA TGCTGATGGT CATGGCAATC GGCGGCGGAA TCCTCTCGCT GATCATGCTT
ATCCATATGA AACTGCGCCC TTCGGAGCGG CCGGTGGAAG TCCCTTATGG TGTAGCCATC
GCCGCCGCAG GACTTTGGGC GCTTCACCAA CACTATCTTA ACCAGTTTCA GGCTATCGGT
TTGTCCTGA
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| Protein sequence | MENGTIALGL MAVLGLMMIA AAVSDIRSRT ISNELNVAMA ILAVPFWVVS GLTLWPDVPI
QFGAALLVFL VFALLFAIGA MGGGDVKMIC AVMLWIPLPL VLPMLMVMAI GGGILSLIML
IHMKLRPSER PVEVPYGVAI AAAGLWALHQ HYLNQFQAIG LS
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