| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1106 |
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| Symbol | |
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| ID | 4082044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1137522 |
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| End bp | 1140011 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009468 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_616156 |
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| Protein GI | 103486595 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGC GCCTTGGCTT TGTCGCAGCA GCGATGGTGC TTTGCCTGCC GGTGCCGGCG
AAGGCGGCCG AGGAACGCGC CTTCGACGTG CGCGGCGGCA GCCTGTCGGC CGTGGTGCCG
GTCATCAGCC GGCAAGGCGG CGTCAGCATC AGCGTCGCCG ACGCCCGGTT ATGGAAAGCG
CGGGTCCGGT CGGTGCGCGG ACGGATGCCC GTCGACGAAG CGATCCGCCG CCTGCTTGCG
GGGACCGACG CACATGCCGT TCGGGTCAGT GCGACGAGCT GGCGCATCGA ACGGCGCCCG
GCGCCGCAGC GTAGCCGCGC CGCTCCCGCT CCGCGGCAAG TGCCCCAGCC CCGCGCACGT
GAACCCGCGA ACGAGGTGGT TGCCGCCGCG GCCGATACGA TCATCGTCAC CGCGTCGAAG
ACCGACCTTC CTTACTCGCA TTTCGCCGGC GTCGTCACCC AATTGGATGG CGGCGAACTG
GCGTTTGGCG GGGAACGCGG GATGGACTCG ATCCTGTCGC GCACCGCCAC GGTCTCCTCG
ACCCATCTGG GTTCGGGACG CAACAAGCTG TTCATCCGCG GCATCGCCGA TTCGAGTTTC
ACCGGCCCGA CGCAGGCAAC GGTCGGCCAG TATCTGGGCG ACATCAGGCT GAGTTACAAC
GCCCCGGACC CCGACCTGCG TCTCTATGAC ATCGACAATG TCGAAATCCT CGAAGGACCG
CAGGGCACGC TTTACGGCGC AGGGTCGCTC GGCGGGATCA TTCGCGTCAT TCCGAAAGCC
CCCGATCCGC GCGGCCCGAC CGTACAGGCG ATCGCGGGCG CCTCGCTGAC CCGGCATGGC
GACCCCGGCG GCGACATCGC CGGCATTGCG AACCTGCCCG TCGGCGAGGA CGGCCATGCG
TTGCGCCTCG TCGGTTACAT GATCACCGAT GGCGGCTATA TCGACAATCC ACTCCGCGGA
CAGAATGACG TCAATCGCGT GCATATCCGG GGCGGCCGCG GCACTCTTCG GCTCGATGCG
GGAGACGGCT GGACCGTCGA TATCGGCGGC ATCTATCAAT CGAACACCTC CGACGATGCC
CAATATGCCG ACAAGGATGC ACCGCCGCTC ACCCGCCGCT CGATGATCGA GCAACCGGCG
AAGGCGCGCT ACGGTCTCGG CACGCTCGTC GTGATGAAGG ATTGGGGCGA TTTGCGCTTT
CAATCGTCGA ACGCCTTTAT CGACCACCGG CTGTTCGAAC GCTTCGACGC CAGCCTGCCG
GTCGCGGGCG AACTGGACGG CTCCGGGTCG GGCAACGCCG TCGGGACCGT CGACGTCGAA
CGCCTCTTCG CGCCGATCGA CATCACGCCG TCGCGCGACG TGCCGCGTCG GCTCGAACAG
CATAATGCGA CGCGGATGTT CGCCAGCGAA AACCGGCTGT GGCGTCCCTA TCACGACGGG
TTTGGCTGGG TCGCCGGGGC AAGCTTCATC ACCAATCGCG CGCGACAGGA ACGCGAATAT
GCCTATGGGC CGCTCCATAC CCCGCTGCCC GGCGTGACCA ACCGGATCAC CGAGTGGACG
GGCTATGCCG AGGCGACCAA GGAACTGCTG ACGGGTCTTG TCGCCTCCGG CGGGCTGCGG
CTGTCGCACG TGCGGCTTGG CGGCATGGCC GAGGATGTGC CGTTCGCGCT TGCCCAGGCG
GGGCGAGCGA CGACGGCATC GCGGCACGAG ACCGACCTCT TGCCCTCCGC CTCGCTGCTT
GCGATGCCGC TCGACAATCT GCGGCTCTAC GCCCGCTATC AGGAGGGATT TCGCCCCGGC
GGGCTTGCCG TCGACGGCAA TTTTGTGCGG CGTTTCAGAA ACGATCGCGT CCAGACGTGG
GAAGCGGGGG TGCGCTTCGG CGACCGAAAG CAGACGCTGC TCGACGCGAC CTTATCTTTG
TCGCACAGCC GCTGGCGCAA CATCCAGGCC GACTTCATCG ACAGCAACGG CTTTCCGACC
ACCGCCAACA TCGGCGACGG CCGCATCACC AGCCTGTCGG GCGCGCTCGC GATGCGGCCG
ACCGACGCGC TGACCCTTGA ACTGGGCGCG GTCTACAACC ACAGCCGCGT CGATGATTTG
TCGCCGGAGA TCCTGCCCGT TTTCGCCGCG ACCCCTGCGC GGCTGGGGCG CATTCCCAAT
GTCGCAAGCC ATGCCGTGCG CGGATCGGTC AACTATGCGA CGATGATCGG CGATGAGGAT
TTTCGTATTA ACGGATGGGC CAACTATATT GGCCCATCCC GGCTTGGCAT CGGCCCGGTG
CTGGGCGAAA GCCAGGGCGA TTATATCGAT ACAGGGCTTG CGATGCGTGT CGGCAACGAC
CGCCGCGGCC TGTCGCTGAC GCTCACCAAC CTGTTCGATT CGCGGGGAAA TCGCTTCTCG
CTCGGCACAC CCTTCGTCGA GGGTAATGCG GGTTTCCTGA CCCCGCTCCG CCCCCGCACG
CTGCGCATCG CCGTCGACGT CGCTTATTAG
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| Protein sequence | METRLGFVAA AMVLCLPVPA KAAEERAFDV RGGSLSAVVP VISRQGGVSI SVADARLWKA
RVRSVRGRMP VDEAIRRLLA GTDAHAVRVS ATSWRIERRP APQRSRAAPA PRQVPQPRAR
EPANEVVAAA ADTIIVTASK TDLPYSHFAG VVTQLDGGEL AFGGERGMDS ILSRTATVSS
THLGSGRNKL FIRGIADSSF TGPTQATVGQ YLGDIRLSYN APDPDLRLYD IDNVEILEGP
QGTLYGAGSL GGIIRVIPKA PDPRGPTVQA IAGASLTRHG DPGGDIAGIA NLPVGEDGHA
LRLVGYMITD GGYIDNPLRG QNDVNRVHIR GGRGTLRLDA GDGWTVDIGG IYQSNTSDDA
QYADKDAPPL TRRSMIEQPA KARYGLGTLV VMKDWGDLRF QSSNAFIDHR LFERFDASLP
VAGELDGSGS GNAVGTVDVE RLFAPIDITP SRDVPRRLEQ HNATRMFASE NRLWRPYHDG
FGWVAGASFI TNRARQEREY AYGPLHTPLP GVTNRITEWT GYAEATKELL TGLVASGGLR
LSHVRLGGMA EDVPFALAQA GRATTASRHE TDLLPSASLL AMPLDNLRLY ARYQEGFRPG
GLAVDGNFVR RFRNDRVQTW EAGVRFGDRK QTLLDATLSL SHSRWRNIQA DFIDSNGFPT
TANIGDGRIT SLSGALAMRP TDALTLELGA VYNHSRVDDL SPEILPVFAA TPARLGRIPN
VASHAVRGSV NYATMIGDED FRINGWANYI GPSRLGIGPV LGESQGDYID TGLAMRVGND
RRGLSLTLTN LFDSRGNRFS LGTPFVEGNA GFLTPLRPRT LRIAVDVAY
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