Gene Sala_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1093 
Symbol 
ID4081568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1122345 
End bp1122743 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content62% 
IMG OID638009454 
Productphenylacetic acid degradation-related protein 
Protein accessionYP_616143 
Protein GI103486582 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCCGT TCGGCCAGGA TTTCGAATTC GCCCGCGCGC TCGGCCTGCA AATGATCGAG 
CGCCGCGACG GGCGTTGCAC GATGGCCATC GATATTGAGC GCGAACGACA TTTCAATCCG
CAAGGCGTCG CCCATGGCGG TGTCGCCTAT TCGCTTGCCG ATACCGCCAT GGGCGGCGCC
CTGTTCAGTT CGCTGGACGA AGGTTTCTGG TGTGCGACAC TCGAGATCAA GTTCAACTAT
CACGTCGGGG TGCGCGAAGG CCGCCTGATT TGCCAAGCAA GCGTGCTGCA CAAGGGCAAG
CGGGTGGCCA ATATCGACGC GCGCCTGTTC CAGAACGACC GGCTCGTCGC GAGCGCCAAC
GGCAATTTCG CGATTTTTCC GGCGCCGGAC GCCGGATAG
 
Protein sequence
MRPFGQDFEF ARALGLQMIE RRDGRCTMAI DIERERHFNP QGVAHGGVAY SLADTAMGGA 
LFSSLDEGFW CATLEIKFNY HVGVREGRLI CQASVLHKGK RVANIDARLF QNDRLVASAN
GNFAIFPAPD AG