Gene Sala_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1078 
Symbol 
ID4082343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1108838 
End bp1109338 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content65% 
IMG OID638009439 
ProductH+-transporting two-sector ATPase, B/B' subunit 
Protein accessionYP_616128 
Protein GI103486567 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGA TAGCCCAGCT CACCGCTGAC AATTGGTATC TTGCCTCGCA GCTTTTCTGG 
CTGCTGGTCG TGTTCGCCGG CATTTACGTC GTAATCGGCC GCGGCATGTT GCCGAAGATC
GAGGCGACGG TGGACGCGCG CGACCGCAAG GTTGCCGACG ATCTGGCGGC GGCAAAAGCG
GCGCATGCCG CTGCCGACAA GCTGGAGGAA AGTTATCGCC AGCAGGGCGA GGCAAGCCGC
GCCGCCGCGC AGAAGGCGGT GGCCGAAGCC AGGGACAAGG CCGCGAAGGA CGCCGAAAAG
CGTTTGGCCC GGATCGATGC CGAACTCGCC GCCAAATTGT CGGCGGCCGA GGCTGACATC
GCGGCAGCGC GCTCGTCGGC GATGGCGGAA ATCGAATCAG TCGCAGCCGA AGCAGCGGGC
GAACTCGTAG CCAAGCTGTC GGGCGTGAAA GTTGCTGCGG CGGATGCCAA GGCGGCAGTT
AAGGCGGTGC TTCATGGCTG A
 
Protein sequence
MPQIAQLTAD NWYLASQLFW LLVVFAGIYV VIGRGMLPKI EATVDARDRK VADDLAAAKA 
AHAAADKLEE SYRQQGEASR AAAQKAVAEA RDKAAKDAEK RLARIDAELA AKLSAAEADI
AAARSSAMAE IESVAAEAAG ELVAKLSGVK VAAADAKAAV KAVLHG