| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1043 |
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| Symbol | |
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| ID | 4080768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1075761 |
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| End bp | 1076444 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009403 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_616093 |
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| Protein GI | 103486532 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTCT CCGATCGCGT CCTCTTCCTC GATGGCGAAG CCCTCGTCAT CGACAAGCCC
GCCGGCCTTC CGGTCGATGC CCCGCGTGAC GGCAGCCTCA GCATCGAGAA CCATCTCGAT
TTGCTGCGCT TCGGTTTCAA GCGCTGGCCG CTGCCCGTGC ACCGGCTCGA TCGCGACACT
TCGGGCTGTC TGCTACTCGC CCGCAATCCC AAGGCGCACG GCCGTTTCAC CCGCGCCTTT
GAAAACCGCG AGGTCGAAAA ACAATATCTC GCGATCATCG ACGGTGTCCC CGCCGACGAT
GGCGGCACGA TCGACCTGCC GCTCGCCAAG ACCTCGACCG CCGAAGCGGG CTGGCGGATG
GTCGTTGACC CCGCTGGAAA ACCCTCGATC TCGCACTGGG AAAAACTCGC GGTCGCCGAT
GGCCGCGCGC TGCTGCGCTT CCGCCCCGAA ACCGGCCGCA CCCACCAGCT TCGCGTCCAC
GCGATCGAGG GGCTTGGCTT TCCACTCGCG GGCGACCCCG TCTATGGCCG CGGCGGCGCG
AAGGGGCGCA CATTGCTTCA CGCCGAACGG CTGGTCGTCA GCCGTGACGT CAAGCCGCCA
ATCATTGCCG AGGCGCCCTT TCCGGAGGCT TTCGCGGCAA TGGGATTCCA GCCGCCCGAG
GGAGCCGCGC CGACCCGTGG CTGA
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| Protein sequence | MLLSDRVLFL DGEALVIDKP AGLPVDAPRD GSLSIENHLD LLRFGFKRWP LPVHRLDRDT
SGCLLLARNP KAHGRFTRAF ENREVEKQYL AIIDGVPADD GGTIDLPLAK TSTAEAGWRM
VVDPAGKPSI SHWEKLAVAD GRALLRFRPE TGRTHQLRVH AIEGLGFPLA GDPVYGRGGA
KGRTLLHAER LVVSRDVKPP IIAEAPFPEA FAAMGFQPPE GAAPTRG
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